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uparma-lib: Lookup library for parameters used in Proteomics tools

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Proteomics is supported by a wide variety of tools. Unfortunately there is no standardized parameter set, thus evaluating a group of tools that tackle the same problem becomes cumbersome as the parameters have to be translated.

The Universal Parameter Mapper Project addresses this problem by offering a standard independent mapping between different styles.

APIs

Currently the following API exist

Rules

  • All '_id' entries in parameters.json have to be unique
  • All styles have to have a reference to the original work
  • Each engine version can only be associated to one translation style

Team

Core team:

  • Johannes Leufken
  • Stefan Schulze
  • Christian Fufezan

Contributors:

  • tbd;