dcm2nii DICOM to NIfTI converter: compiled versions available from NITRC

Software platform for clinical neuroimaging studies

v1.2 GLSL volume rendering. Able to view NIfTI, DICOM, MGH, MHD, NRRD, AFNI format images.

Utility functions for working with DICOM and BIDS neuroimaging data

bids application for processing functional MRI data, robust to scanner, acquisition and age variability.

a set of function to make it easier to create behavioral, EEG, fMRI experiment with psychtoolbox

Create a BIDS structure for a DICOM folder.

BV2BIDS is a command line tool that creates the EEG-BIDS folder hierarchy from BVCD files.

The NEXT fMRI analyisis workflow of xIA

Example fNIRS BIDS dataset

Easily convert to, organize, and manage BIDS imaging data in Python

afniGLMprep is python code which prepares and runs GLMs on neuroimaging data stored in the BIDS format (http://bids.neuroimaging.io/). This is done via AFNI's 3dDeconvolve function.

Reconstruction of preprocessed q-space images (dMRI)

Portable, modular, reusable, and reproducible processing pipeline software for fetal brain MRI super-resolution

Tools created for sharing of MRI and behavioural data as part of my work with Professor Kate Watkins in the Speech & Brain Lab at the University of Oxford.

HED/BIDS-friendly JavaScript validator.

Web guided ReproIn MR scan sequence namer and name->nifti pipeline checker

BIDSAlign a library for preprocessing and align multiple datasets to a common template.

Convert HCP Lifespan, Aging, and Development data to BIDS format

Rapid and automated conversion of neuroimaging data to BIDS