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mmseqs extractorfs can tranlate orfs but CLI does not allow to specify tranlation table #42

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SilasK opened this issue Mar 10, 2023 · 2 comments
Open

mmseqs extractorfs can tranlate orfs but CLI does not allow to specify tranlation table #42

SilasK opened this issue Mar 10, 2023 · 2 comments

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@SilasK
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SilasK commented Mar 10, 2023

mmseqs extractorfs can tranlate orfs but cli does not allow to specify tranlation table

Unless this is a hidden option.
@milot-mirdita
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mseqs extractorfs -h shows all hidden options. With -h set you can see --translation-table INT.

@milot-mirdita
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I didn't notice that you posted this in the plass repository. Same is true for plass -h.

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@milot-mirdita @SilasK