From 6a2df6bd0d54975813cf2f1424e296a55271cfcc Mon Sep 17 00:00:00 2001
From: Joey Lee <leejoey0921@gmail.com>
Date: Mon, 2 Sep 2024 13:00:17 +0900
Subject: [PATCH] feat: update regression results

---
 regression/run_cluster.sh               | 2 +-
 regression/run_cluster_update.sh        | 2 +-
 regression/run_easy_cluster.sh          | 2 +-
 regression/run_easy_cluster_reassign.sh | 2 +-
 regression/run_easy_linclust.sh         | 2 +-
 regression/run_linclust.sh              | 2 +-
 regression/run_linclust_split.sh        | 2 +-
 7 files changed, 7 insertions(+), 7 deletions(-)

diff --git a/regression/run_cluster.sh b/regression/run_cluster.sh
index 34159cf..10b407b 100755
--- a/regression/run_cluster.sh
+++ b/regression/run_cluster.sh
@@ -8,7 +8,7 @@ CLUDB="${RESULTS}/clu"
 
 awk 'BEGIN { l = "" } l != $1 { l = $1; cnt++; } { t++; } END { print cnt"\t"t"\t"(t/cnt) }' "$RESULTS/results_cluster.tsv" > "$RESULTS/results_summary.tsv"
 ACTUAL="$(cut -f1 "$RESULTS/results_summary.tsv")"
-TARGET="15722"
+TARGET="15710"
 awk -v actual="$ACTUAL" -v target="$TARGET" \
     'BEGIN { print (actual == target) ? "GOOD" : "BAD"; print "Expected: ", target; print "Actual: ", actual; }' \
     > "${RESULTS}.report"
diff --git a/regression/run_cluster_update.sh b/regression/run_cluster_update.sh
index 5c1c6c2..8b50906 100755
--- a/regression/run_cluster_update.sh
+++ b/regression/run_cluster_update.sh
@@ -17,7 +17,7 @@ CLUSTERMEMEBER=$(wc -l "$RESULTS/clu_updated.tsv" | awk '{print $1}')
 CLUSTER=$(echo $(cut -f1 "$RESULTS/clu_updated.tsv" | sort -u | wc -l))
 UPDATEDSEQCNT=$(wc -l "$RESULTS/seqdb_update.index" | awk '{print $1}')
 
-TARGET="32132 24753 32132"
+TARGET="32132 24742 32132"
 ACTUAL="$CLUSTERMEMEBER $CLUSTER $UPDATEDSEQCNT"
 awk -v actual="$ACTUAL" -v target="$TARGET" 'BEGIN { print (actual == target) ? "GOOD" : "BAD"; \
     print "Expected: ", target; \
diff --git a/regression/run_easy_cluster.sh b/regression/run_easy_cluster.sh
index 8cc986c..9e97437 100755
--- a/regression/run_easy_cluster.sh
+++ b/regression/run_easy_cluster.sh
@@ -3,7 +3,7 @@
 
 awk 'BEGIN { l = "" } l != $1 { l = $1; cnt++; } { t++; } END { print cnt"\t"t"\t"(t/cnt) }' "$RESULTS/results_cluster.tsv" > "$RESULTS/results_summary.tsv"
 ACTUAL="$(cut -f1 "$RESULTS/results_summary.tsv")"
-TARGET="15722"
+TARGET="15710"
 awk -v actual="$ACTUAL" -v target="$TARGET" \
     'BEGIN { print (actual == target) ? "GOOD" : "BAD"; print "Expected: ", target; print "Actual: ", actual; }' \
     > "${RESULTS}.report"
diff --git a/regression/run_easy_cluster_reassign.sh b/regression/run_easy_cluster_reassign.sh
index 67a50ba..691a37c 100755
--- a/regression/run_easy_cluster_reassign.sh
+++ b/regression/run_easy_cluster_reassign.sh
@@ -4,7 +4,7 @@ cat  "${DATADIR}/clu.fasta" | "${MMSEQS}" easy-cluster stdin "$RESULTS/results"
 
 awk 'BEGIN { l = "" } l != $1 { l = $1; cnt++; } { t++; } END { print cnt"\t"t"\t"(t/cnt) }' "$RESULTS/results_cluster.tsv" > "$RESULTS/results_summary.tsv"
 ACTUAL="$(cut -f1 "$RESULTS/results_summary.tsv")"
-TARGET="17257"
+TARGET="17248"
 awk -v actual="$ACTUAL" -v target="$TARGET" \
     'BEGIN { print (actual == target) ? "GOOD" : "BAD"; print "Expected: ", target; print "Actual: ", actual; }' \
     > "${RESULTS}.report"
diff --git a/regression/run_easy_linclust.sh b/regression/run_easy_linclust.sh
index aba13fd..3e5e04a 100755
--- a/regression/run_easy_linclust.sh
+++ b/regression/run_easy_linclust.sh
@@ -3,7 +3,7 @@
 
 awk 'BEGIN { l = "" } l != $1 { l = $1; cnt++; } { t++; } END { print cnt"\t"t"\t"(t/cnt) }' "$RESULTS/results_cluster.tsv" > "$RESULTS/results_summary.tsv"
 ACTUAL="$(cut -f1 "$RESULTS/results_summary.tsv")"
-TARGET="26493"
+TARGET="26146"
 awk -v actual="$ACTUAL" -v target="$TARGET" \
     'BEGIN { print (actual == target) ? "GOOD" : "BAD"; print "Expected: ", target; print "Actual: ", actual; }' \
     > "${RESULTS}.report"
diff --git a/regression/run_linclust.sh b/regression/run_linclust.sh
index 7cfdd29..fd10a4c 100755
--- a/regression/run_linclust.sh
+++ b/regression/run_linclust.sh
@@ -7,7 +7,7 @@ CLUDB=
 
 awk 'BEGIN { l = "" } l != $1 { l = $1; cnt++; } { t++; } END { print cnt"\t"t"\t"(t/cnt) }' "$RESULTS/results_cluster.tsv" > "$RESULTS/results_summary.tsv"
 ACTUAL="$(cut -f1 "$RESULTS/results_summary.tsv")"
-TARGET="26491"
+TARGET="26135"
 awk -v actual="$ACTUAL" -v target="$TARGET" \
     'BEGIN { print (actual == target) ? "GOOD" : "BAD"; print "Expected: ", target; print "Actual: ", actual; }' \
     > "${RESULTS}.report"
diff --git a/regression/run_linclust_split.sh b/regression/run_linclust_split.sh
index 3d8c340..b78987b 100755
--- a/regression/run_linclust_split.sh
+++ b/regression/run_linclust_split.sh
@@ -6,7 +6,7 @@
 
 awk 'BEGIN { l = "" } l != $1 { l = $1; cnt++; } { t++; } END { print cnt"\t"t"\t"(t/cnt) }' "$RESULTS/results_cluster.tsv" > "$RESULTS/results_summary.tsv"
 ACTUAL="$(cut -f1 "$RESULTS/results_summary.tsv")"
-TARGET="26491"
+TARGET="26135"
 awk -v actual="$ACTUAL" -v target="$TARGET" \
     'BEGIN { print (actual == target) ? "GOOD" : "BAD"; print "Expected: ", target; print "Actual: ", actual; }' \
     > "${RESULTS}.report"