CHANGELOG.md

Changelog

1.1.2 (2024-10-20)

Bug Fixes

• protein hashing (4ee41be)

1.1.1 (2024-10-20)

Bug Fixes

• protein hashing (da55247)

1.1.0 (2024-10-20)

⚠ BREAKING CHANGES

• changes protein hashing behavior

Features

• GFF input (367c3a6)

Bug Fixes

• changes protein hashing behavior (f638f1d)
• error on no fasta (428dd4a)
• kwargs (78fb849)
• socialgene object genbank output (1d9d935)
• typo (8a41d74)

Miscellaneous Chores

• release 1.1.0 (9bc7d39)

1.0.1 (2024-08-13)

Bug Fixes

• neo4j node addons (a557e9c)

1.0.0 (2024-07-24)

Miscellaneous Chores

• release 1.0.0 (588916a)

0.7.0 (2024-07-23)

Miscellaneous Chores

• release 0.7.0 (9f42803)

0.6.7 (2024-06-21)

Miscellaneous Chores

• release 0.6.7 (c14da50)

0.6.6 (2024-04-08)

Bug Fixes

• init (d24eaa1)

0.6.5 (2024-04-08)

Bug Fixes

• add outpath arg for bgc search cli (36f2ad7)

0.6.4 (2024-03-18)

Bug Fixes

• neo4j admin import relationship labels (83342e9)
• node/rel neo4j admin import command (d1d828e)

0.6.3 (2024-03-13)

Bug Fixes

• multiline (1e1c4ca)

0.6.2 (2024-03-13)

Bug Fixes

• multiline (#93) (7b4f0c8)

0.6.1 (2024-03-12)

Bug Fixes

• missing init (1aaa0a7)

0.6.0 (2024-03-11)

Miscellaneous Chores

• release 0.6.0 (6aa84af)

0.5.1 (2024-03-01)

Bug Fixes

• hmm_source_relationships.header (#88) (a500cb2)

0.5.0 (2024-01-17)

Features

• repesent antismash bgcs as nodes and/or edges (#83) (8348a12)

0.4.0 (2023-12-21)

Miscellaneous Chores

• release 0.4.0 (cafc013)

0.3.3 (2023-11-17)

Miscellaneous Chores

• release 0.3.3 (dd02dd2)

0.3.2 (2023-11-16)

Bug Fixes

• imap (e1b77d9)

0.3.1 (2023-11-16)

Bug Fixes

• imap (8d91663)

0.3.0 (2023-11-16)

Features

• enable filtering or not when processing domtblout (4614e4c)

0.2.2 (2023-11-16)

Bug Fixes

• read env HMMSEARCH_IEVALUE as float (#71) (d0bc557)

0.2.1 (2023-11-14)

Bug Fixes

• fixes for python 3.12 (#69) (954c4a6)

0.2.0 (2023-11-08)

Features

• large update (#67) (fc8cb37)

Bug Fixes

• . (b35cb46)

0.1.12 (2023-10-12)

Bug Fixes

• mac compatibility (380bd9f)
• Preparing for publication (#66) (6e84b99)

Documentation

• ai assisted docs (20c6a0f)

0.1.11 (2023-07-03)

Bug Fixes

• move crc64 into second col of protein_ids (393319c)

0.1.10 (2023-07-03)

Bug Fixes

• switch additional hash from md5 to cr64 (097e56b)

0.1.9 (2023-07-02)

Bug Fixes

• Revert default hash from CRC64 to sha512t24u (#56) (e9abd6c)

0.1.8 (2023-06-22)

Bug Fixes

• rich as non-optional (77b0c3b)

0.1.7 (2023-06-22)

Bug Fixes

• locus_to_protein boolean properties (#50) (8678e1c)
• numeric types for admin-import (#52) (bdc71c6)

0.1.6 (2023-06-19)

Bug Fixes

• reverse goterm alt_id direction (3f5dca1)

0.1.5 (2023-06-19)

Bug Fixes

• tigrfam ids (73897a0)

0.1.4 (2023-06-19)

Bug Fixes

• goterm alt_ids (394e62c)

0.1.3 (2023-06-19)

Bug Fixes

• custom goterms OBO parser (0ac009b)
• flake8 (c25abcc)
• goterm header order switch (dc24d5f)

Documentation

• edit readme (dd93b13)

0.1.2 (2023-06-16)

Bug Fixes

• pypi (107260b)

0.1.1 (2023-06-16)

Bug Fixes

• release 0.1.1 (1385d65)

0.1.0 (2023-06-16)

Bug Fixes

• re-init (35cb279)