diff --git a/conda/env/lock/pcgr-linux-64.lock b/conda/env/lock/pcgr-linux-64.lock index 19171bc7..4f29e977 100644 --- a/conda/env/lock/pcgr-linux-64.lock +++ b/conda/env/lock/pcgr-linux-64.lock @@ -1,6 +1,6 @@ # Generated by conda-lock. # platform: linux-64 -# input_hash: 3005e979da5e77c53806d22d30d13d896a9710735e1f139a30997715be762655 +# input_hash: e6bc9cf14e955566723c550da4170eb8e77dd54da286b0c122999fea7310ae0c @EXPLICIT https://conda.anaconda.org/conda-forge/linux-64/_libgcc_mutex-0.1-conda_forge.tar.bz2#d7c89558ba9fa0495403155b64376d81 https://conda.anaconda.org/bioconda/linux-64/blast-legacy-2.2.26-h9ee0642_4.tar.bz2#d35a85be775b5181e48cc3a5510cd6f3 @@ -77,7 +77,7 @@ https://conda.anaconda.org/conda-forge/linux-64/zstd-1.5.6-ha6fb4c9_0.conda#4d05 https://conda.anaconda.org/conda-forge/linux-64/gcc_linux-64-10.4.0-h9215b83_13.conda#a38a8d1059689117691fb736215a196a https://conda.anaconda.org/conda-forge/linux-64/krb5-1.21.3-h659f571_0.conda#3f43953b7d3fb3aaa1d0d0723d91e368 https://conda.anaconda.org/conda-forge/linux-64/libasprintf-devel-0.22.5-he8f35ee_3.conda#1091193789bb830127ed067a9e01ac57 -https://conda.anaconda.org/conda-forge/linux-64/libopenblas-0.3.27-pthreads_hac2b453_1.conda#ae05ece66d3924ac3d48b4aa3fa96cec +https://conda.anaconda.org/conda-forge/linux-64/libopenblas-0.3.28-pthreads_h94d23a6_0.conda#9ebc9aedafaa2515ab247ff6bb509458 https://conda.anaconda.org/conda-forge/linux-64/libprotobuf-4.25.3-h08a7969_0.conda#6945825cebd2aeb16af4c69d97c32c13 https://conda.anaconda.org/conda-forge/linux-64/mpfr-4.2.1-h90cbb55_3.conda#2eeb50cab6652538eee8fc0bc3340c81 https://conda.anaconda.org/conda-forge/linux-64/mysql-client-8.3.0-h545f5f4_4.conda#0570644b7f6a2f104242653405a56d09 @@ -135,7 +135,7 @@ https://conda.anaconda.org/conda-forge/linux-64/cyrus-sasl-2.1.27-h54b06d7_7.con https://conda.anaconda.org/conda-forge/linux-64/gawk-5.3.1-hcd3d067_0.conda#91d4414ab699180b2b0b10b8112c5a2f https://conda.anaconda.org/conda-forge/linux-64/gettext-0.22.5-he02047a_3.conda#c7f243bbaea97cd6ea1edd693270100e https://conda.anaconda.org/conda-forge/noarch/humanfriendly-10.0-pyhd8ed1ab_6.conda#2ed1fe4b9079da97c44cfe9c2e5078fd -https://conda.anaconda.org/conda-forge/linux-64/libblas-3.9.0-24_linux64_openblas.conda#80aea6603a6813b16ec119d00382b772 +https://conda.anaconda.org/conda-forge/linux-64/libblas-3.9.0-25_linux64_openblas.conda#8ea26d42ca88ec5258802715fe1ee10b https://conda.anaconda.org/conda-forge/linux-64/libcurl-8.8.0-hca28451_1.conda#b8afb3e3cb3423cc445cf611ab95fdb0 https://conda.anaconda.org/conda-forge/linux-64/mysql-devel-8.3.0-hf1915f5_4.conda#e115c63a884987a6f1aca12d782d5a8f https://conda.anaconda.org/bioconda/noarch/perl-bioperl-core-1.7.8-pl5321hdfd78af_1.tar.bz2#e627a38fe206468089dc73a0aafb6c8c @@ -165,9 +165,9 @@ https://conda.anaconda.org/conda-forge/noarch/wheel-0.44.0-pyhd8ed1ab_0.conda#d4 https://conda.anaconda.org/conda-forge/noarch/coloredlogs-15.0.1-pyhd8ed1ab_3.tar.bz2#7b4fc18b7f66382257c45424eaf81935 https://conda.anaconda.org/conda-forge/linux-64/curl-8.8.0-he654da7_1.conda#78678b2ddfd9bd7c7861b8d2e3b7473b https://conda.anaconda.org/bioconda/linux-64/htslib-1.21-h5efdd21_0.tar.bz2#06b995dc2244c024b45bbb3e53ae2f27 -https://conda.anaconda.org/conda-forge/linux-64/libcblas-3.9.0-24_linux64_openblas.conda#f5b8822297c9c790cec0795ca1fc9be6 +https://conda.anaconda.org/conda-forge/linux-64/libcblas-3.9.0-25_linux64_openblas.conda#5dbd1b0fc0d01ec5e0e1fbe667281a11 https://conda.anaconda.org/conda-forge/linux-64/libidn2-2.3.7-hd590300_0.conda#2b7b0d827c6447cc1d85dc06d5b5de46 -https://conda.anaconda.org/conda-forge/linux-64/liblapack-3.9.0-24_linux64_openblas.conda#fd540578678aefe025705f4b58b36b2e +https://conda.anaconda.org/conda-forge/linux-64/liblapack-3.9.0-25_linux64_openblas.conda#4dc03a53fc69371a6158d0ed37214cd3 https://conda.anaconda.org/bioconda/linux-64/mafft-7.525-h031d066_1.tar.bz2#cc14d0dc05b87e030ee1cc168e33cedf https://conda.anaconda.org/conda-forge/linux-64/mysql-server-8.3.0-h27b9c54_4.conda#71d665212ba760a525a403941da11564 https://conda.anaconda.org/bioconda/linux-64/perl-bio-samtools-1.43-pl5321he4a0461_4.tar.bz2#e766315d6c69e23e74e5917f77d96ab1 @@ -210,9 +210,9 @@ https://conda.anaconda.org/bioconda/noarch/perl-uri-5.12-pl5321hdfd78af_0.tar.bz https://conda.anaconda.org/bioconda/linux-64/pybedtools-0.10.0-py312ha1f7cf2_2.tar.bz2#a67f6a98671372d457471d20467c6d23 https://conda.anaconda.org/conda-forge/linux-64/scipy-1.14.1-py312h62794b6_1.conda#b43233a9e2f62fb94affe5607ea79473 https://conda.anaconda.org/bioconda/noarch/vcf2maf-umccr-1.6.21.20230511-hdfd78af_0.tar.bz2#ec3a03df0bce17c35b2a2d1436c718ea -https://conda.anaconda.org/bioconda/linux-64/viennarna-2.6.4-py312pl5321h9f0f9fd_3.tar.bz2#1b43d20dbe0a4dbc6d8d958bce7bc37b +https://conda.anaconda.org/bioconda/linux-64/viennarna-2.7.0-py312pl5321h9f0f9fd_0.tar.bz2#2a4e6de13da106cca248a3fe2c71e667 https://conda.anaconda.org/bioconda/linux-64/blast-2.16.0-hc155240_2.tar.bz2#7870230d4cc0a7647eb90b6e2ebd977f -https://conda.anaconda.org/pcgr/noarch/pcgr-2.1.2-py_0.tar.bz2#f947ead6299bd52fffab3137eeb25e7a +https://conda.anaconda.org/pcgr/noarch/pcgr-2.1.2.9001-py_0.tar.bz2#4f32433ffb78a5e9b8cdce69e42c5ca0 https://conda.anaconda.org/bioconda/noarch/perl-http-message-6.36-pl5321hdfd78af_0.tar.bz2#a213d1308ffa8e0789996ae6ecda98ae https://conda.anaconda.org/bioconda/noarch/perl-net-http-6.22-pl5321hdfd78af_0.tar.bz2#f3b44f2b9932c3def346e6ad9aabe43d https://conda.anaconda.org/bioconda/noarch/perl-www-robotrules-6.02-pl5321hdfd78af_4.tar.bz2#8305f4ed6306b1125a8c8caf2f05aec8 @@ -230,4 +230,4 @@ https://conda.anaconda.org/bioconda/noarch/perl-bio-featureio-1.6.905-pl5321hdfd https://conda.anaconda.org/bioconda/noarch/perl-bioperl-1.7.8-hdfd78af_1.tar.bz2#a693939710e572d0f85f6058b534e319 https://conda.anaconda.org/bioconda/linux-64/perl-bio-bigfile-1.07-pl5321h84c94e8_4.tar.bz2#b4ef5e34b6612a78427b0bf26481a90f https://conda.anaconda.org/bioconda/linux-64/perl-bio-db-hts-3.01-pl5321he4a0461_9.tar.bz2#3b9d82fded871252fb6be771eb78d69a -https://conda.anaconda.org/bioconda/noarch/ensembl-vep-112.0-pl5321h2a3209d_0.tar.bz2#483c04201882a9ba1b18ddb505ea284b +https://conda.anaconda.org/bioconda/noarch/ensembl-vep-113.0-pl5321h2a3209d_0.tar.bz2#b656f1321c5f365bf40a14c8c4b39659 diff --git a/conda/env/lock/pcgr-osx-64.lock b/conda/env/lock/pcgr-osx-64.lock index 45400ffc..8ebab2ce 100644 --- a/conda/env/lock/pcgr-osx-64.lock +++ b/conda/env/lock/pcgr-osx-64.lock @@ -1,6 +1,6 @@ # Generated by conda-lock. # platform: osx-64 -# input_hash: 023d8d8d7620a225875e18d2283266c7744a6e131900002676fdebf9686850e8 +# input_hash: 16986f7b9d5fe0556b3895ccf58718733346a2e9f62e5f5bce5652a458d293f0 @EXPLICIT https://conda.anaconda.org/conda-forge/osx-64/argtable2-2.13-h10d778d_1004.conda#7ebcbc431363dfbf9ae25e6a7205d414 https://conda.anaconda.org/conda-forge/osx-64/ca-certificates-2024.8.30-h8857fd0_0.conda#b7e5424e7f06547a903d28e4651dbb21 @@ -145,7 +145,7 @@ https://conda.anaconda.org/conda-forge/noarch/humanfriendly-10.0-pyhd8ed1ab_6.co https://conda.anaconda.org/conda-forge/osx-64/ld64_osx-64-609-hc6b1d1e_10.tar.bz2#4a5fdb42da6da735f2f4778d63b4b9f0 https://conda.anaconda.org/conda-forge/osx-64/libclang-cpp12-12.0.1-default_he082bbe_4.tar.bz2#2e53c06139a0b687f970e0538c0c4fd7 https://conda.anaconda.org/conda-forge/osx-64/libcurl-7.87.0-haf73cf8_0.conda#c5ad60467758fbc6a285c96d3c59a74c -https://conda.anaconda.org/conda-forge/osx-64/libopenblas-0.3.27-openmp_h8869122_1.conda#c0798ad76ddd730dade6ff4dff66e0b5 +https://conda.anaconda.org/conda-forge/osx-64/libopenblas-0.3.28-openmp_h8869122_0.conda#6bf3c78f6d014543765570c8e1c65642 https://conda.anaconda.org/conda-forge/osx-64/llvm-tools-12.0.1-hd011deb_2.tar.bz2#9864ddf73340515b93c2ff18da33ec8d https://conda.anaconda.org/conda-forge/osx-64/mysql-devel-8.0.32-h7ebae80_0.conda#40a67c7d39eb096bf5ea33902db1c314 https://conda.anaconda.org/bioconda/noarch/perl-archive-tar-2.40-pl5321hdfd78af_0.tar.bz2#ef5f007762b5ad9425694104d7db4463 @@ -161,14 +161,14 @@ https://conda.anaconda.org/conda-forge/noarch/pytz-2024.1-pyhd8ed1ab_0.conda#3ee https://conda.anaconda.org/conda-forge/osx-64/pyyaml-6.0.2-py310h837254d_1.conda#f66b37a401bdbf379080ba9c62854730 https://conda.anaconda.org/conda-forge/noarch/setuptools-75.1.0-pyhd8ed1ab_0.conda#d5cd48392c67fb6849ba459c2c2b671f https://conda.anaconda.org/conda-forge/noarch/six-1.16.0-pyh6c4a22f_0.tar.bz2#e5f25f8dbc060e9a8d912e432202afc2 -https://conda.anaconda.org/bioconda/osx-64/viennarna-2.6.4-py310pl5321h050e90c_3.tar.bz2#15a15f13e6fd883a1bca5b2a2391b3bd +https://conda.anaconda.org/bioconda/osx-64/viennarna-2.7.0-py310pl5321h050e90c_0.tar.bz2#fa8105f176da9fe4e716b842800744b0 https://conda.anaconda.org/conda-forge/noarch/wheel-0.44.0-pyhd8ed1ab_0.conda#d44e3b085abcaef02983c6305b84b584 https://conda.anaconda.org/conda-forge/osx-64/cctools_osx-64-973.0.1-hcc6d90d_12.conda#5e2c08283fa0292e0e40776a2b9ebb1c https://conda.anaconda.org/conda-forge/osx-64/clang-12-12.0.1-default_he082bbe_4.tar.bz2#24691a609d62717554c14f2d466677dd https://conda.anaconda.org/conda-forge/noarch/coloredlogs-15.0.1-pyhd8ed1ab_3.tar.bz2#7b4fc18b7f66382257c45424eaf81935 https://conda.anaconda.org/conda-forge/osx-64/curl-7.87.0-haf73cf8_0.conda#34ea7748d232177be914a5f36735cb51 https://conda.anaconda.org/bioconda/osx-64/htslib-1.16-h567f53e_0.tar.bz2#bd9c90cc85661d07c6e86294e59d3051 -https://conda.anaconda.org/conda-forge/osx-64/libblas-3.9.0-22_osx64_openblas.conda#b80966a8c8dd0b531f8e65f709d732e8 +https://conda.anaconda.org/conda-forge/osx-64/libblas-3.9.0-25_osx64_openblas.conda#da0a6f87958893e1d2e2bbc7e7a6541f https://conda.anaconda.org/conda-forge/osx-64/libidn2-2.3.7-h10d778d_0.conda#a985867eae03167666bba45c2a297da1 https://conda.anaconda.org/bioconda/osx-64/mafft-7.525-h2413b67_1.tar.bz2#04c50db823c32795686ad381695bb949 https://conda.anaconda.org/conda-forge/osx-64/mysql-server-8.0.32-ha134c4c_0.conda#a670483ac75d19fcc527de2a96058615 @@ -182,8 +182,8 @@ https://conda.anaconda.org/conda-forge/noarch/pip-24.2-pyh8b19718_1.conda#6c78fb https://conda.anaconda.org/bioconda/osx-64/pysam-0.20.0-py310h958c131_0.tar.bz2#01dbf9c71231399855ecdde09b5d4218 https://conda.anaconda.org/conda-forge/noarch/python-dateutil-2.9.0-pyhd8ed1ab_0.conda#2cf4264fffb9e6eff6031c5b6884d61c https://conda.anaconda.org/conda-forge/osx-64/clang-12.0.1-h694c41f_4.tar.bz2#4d268a40da1d13cbb60eaf9c9e301c17 -https://conda.anaconda.org/conda-forge/osx-64/libcblas-3.9.0-22_osx64_openblas.conda#b9fef82772330f61b2b0201c72d2c29b -https://conda.anaconda.org/conda-forge/osx-64/liblapack-3.9.0-22_osx64_openblas.conda#f21b282ff7ba14df6134a0fe6ab42b1b +https://conda.anaconda.org/conda-forge/osx-64/libcblas-3.9.0-25_osx64_openblas.conda#ab304b75ea67f850cf7adf9156e3f62f +https://conda.anaconda.org/conda-forge/osx-64/liblapack-3.9.0-25_osx64_openblas.conda#dda0e24b4605ebbd381e48606a107bed https://conda.anaconda.org/conda-forge/osx-64/mysql-8.0.32-h57ddcff_0.conda#a459df84c70ba25696c0fc0a72de1900 https://conda.anaconda.org/bioconda/noarch/perl-bioperl-run-1.007003-pl5321hdfd78af_0.tar.bz2#5b7b092efda407c9af1981426d83f3f5 https://conda.anaconda.org/bioconda/noarch/perl-http-message-6.36-pl5321hdfd78af_0.tar.bz2#a213d1308ffa8e0789996ae6ecda98ae @@ -212,7 +212,7 @@ https://conda.anaconda.org/bioconda/noarch/perl-libwww-perl-6.67-pl5321hdfd78af_ https://conda.anaconda.org/bioconda/osx-64/pybedtools-0.10.0-py310h0b3aad1_2.tar.bz2#2674eda3d1eb4d1445dfcc11ae51b28b https://conda.anaconda.org/conda-forge/osx-64/scipy-1.14.1-py310h9ad1863_1.conda#481a6063c89dd8864258ff46839c4a3a https://conda.anaconda.org/conda-forge/osx-64/compiler-rt-12.0.1-he01351e_0.tar.bz2#aa2cb3794dae4a09f19c3b7169b5df1f -https://conda.anaconda.org/pcgr/noarch/pcgr-2.1.2-py_0.tar.bz2#f947ead6299bd52fffab3137eeb25e7a +https://conda.anaconda.org/pcgr/noarch/pcgr-2.1.2.9001-py_0.tar.bz2#4f32433ffb78a5e9b8cdce69e42c5ca0 https://conda.anaconda.org/bioconda/noarch/perl-xml-dom-1.46-pl5321hdfd78af_1.tar.bz2#45b7ce435727456727f45b3e2121b23b https://conda.anaconda.org/bioconda/osx-64/t-coffee-12.00.7fb08c2-h26a2512_0.tar.bz2#fe6f3532da0e9d3868b58ecd07f33744 https://conda.anaconda.org/bioconda/noarch/vcf2tsvpy-0.6.1-pyhda70652_0.tar.bz2#cb9612a58cefb7e2a144c759027c0a94 @@ -225,4 +225,4 @@ https://conda.anaconda.org/bioconda/noarch/perl-bioperl-1.7.8-hdfd78af_1.tar.bz2 https://conda.anaconda.org/bioconda/osx-64/perl-dbd-mysql-4.050-pl5321h85dcccf_1.tar.bz2#a42b3079d847a98d0a10faa2484a34af https://conda.anaconda.org/bioconda/osx-64/perl-bio-bigfile-1.07-pl5321h8ea37c3_3.tar.bz2#c2f399c32016d78026506ccce1e9763f https://conda.anaconda.org/bioconda/osx-64/perl-bio-db-hts-3.01-pl5321h4c174fa_6.tar.bz2#a6e7decd4a436f3ded3a56a308801450 -https://conda.anaconda.org/bioconda/noarch/ensembl-vep-112.0-pl5321h2a3209d_0.tar.bz2#483c04201882a9ba1b18ddb505ea284b +https://conda.anaconda.org/bioconda/noarch/ensembl-vep-113.0-pl5321h2a3209d_0.tar.bz2#b656f1321c5f365bf40a14c8c4b39659 diff --git a/conda/env/lock/pcgrr-linux-64.lock b/conda/env/lock/pcgrr-linux-64.lock index dea854e3..3c2df874 100644 --- a/conda/env/lock/pcgrr-linux-64.lock +++ b/conda/env/lock/pcgrr-linux-64.lock @@ -1,6 +1,6 @@ # Generated by conda-lock. # platform: linux-64 -# input_hash: 3740be8b808c809da5f9a30fc92451ac7491c60067e47d789870fe6e83969135 +# input_hash: c2fdbbd3687a5a91bddffb23a299cfb342d30a469ef15b9d9c385f1870ee89c3 @EXPLICIT https://conda.anaconda.org/conda-forge/linux-64/_libgcc_mutex-0.1-conda_forge.tar.bz2#d7c89558ba9fa0495403155b64376d81 https://conda.anaconda.org/conda-forge/noarch/_r-mutex-1.0.1-anacondar_1.tar.bz2#19f9db5f4f1b7f5ef5f6d67207f25f38 @@ -16,13 +16,13 @@ https://conda.anaconda.org/conda-forge/linux-64/pandoc-3.2-ha770c72_0.conda#8c92 https://conda.anaconda.org/conda-forge/linux-64/python_abi-3.13-5_cp313.conda#381bbd2a92c863f640a55b6ff3c35161 https://conda.anaconda.org/conda-forge/noarch/tzdata-2024b-hc8b5060_0.conda#8ac3367aafb1cc0a068483c580af8015 https://conda.anaconda.org/conda-forge/noarch/fonts-conda-forge-1-0.tar.bz2#f766549260d6815b0c52253f1fb1bb29 -https://conda.anaconda.org/conda-forge/linux-64/ld_impl_linux-64-2.43-h712a8e2_1.conda#83e1364586ceb8d0739fbc85b5c95837 +https://conda.anaconda.org/conda-forge/linux-64/ld_impl_linux-64-2.43-h712a8e2_2.conda#048b02e3962f066da18efe3a21b77672 https://conda.anaconda.org/conda-forge/noarch/libgcc-devel_linux-64-14.2.0-h41c2201_101.conda#fb126e22f5350c15fec6ddbd062f4871 https://conda.anaconda.org/conda-forge/linux-64/libgomp-14.2.0-h77fa898_1.conda#cc3573974587f12dda90d96e3e55a702 https://conda.anaconda.org/conda-forge/noarch/libstdcxx-devel_linux-64-14.2.0-h41c2201_101.conda#60b9a16fd147f7184b5a964aa08f3b0f https://conda.anaconda.org/conda-forge/noarch/sysroot_linux-64-2.17-h4a8ded7_17.conda#f58cb23983633068700a756f0b5f165a https://conda.anaconda.org/conda-forge/linux-64/_openmp_mutex-4.5-2_gnu.tar.bz2#73aaf86a425cc6e73fcf236a5a46396d -https://conda.anaconda.org/conda-forge/linux-64/binutils_impl_linux-64-2.43-h4bf12b8_1.conda#5f354010f194e85dc681dec92405ef9e +https://conda.anaconda.org/conda-forge/linux-64/binutils_impl_linux-64-2.43-h4bf12b8_2.conda#cf0c5521ac2a20dfa6c662a4009eeef6 https://conda.anaconda.org/conda-forge/noarch/fonts-conda-ecosystem-1-0.tar.bz2#fee5683a3f04bd15cbd8318b096a27ab https://conda.anaconda.org/conda-forge/linux-64/libgcc-14.2.0-h77fa898_1.conda#3cb76c3f10d3bc7f1105b2fc9db984df https://conda.anaconda.org/conda-forge/linux-64/c-ares-1.34.2-heb4867d_0.conda#2b780c0338fc0ffa678ac82c54af51fd @@ -54,7 +54,7 @@ https://conda.anaconda.org/conda-forge/linux-64/libjpeg-turbo-3.0.0-hd590300_1.c https://conda.anaconda.org/conda-forge/linux-64/libmpdec-4.0.0-h4bc722e_0.conda#aeb98fdeb2e8f25d43ef71fbacbeec80 https://conda.anaconda.org/conda-forge/linux-64/libpng-1.6.44-hadc24fc_0.conda#f4cc49d7aa68316213e4b12be35308d1 https://conda.anaconda.org/conda-forge/linux-64/libsanitizer-14.2.0-h2a3dede_1.conda#160623b9425f5c04941586da43bd1a9c -https://conda.anaconda.org/conda-forge/linux-64/libsqlite-3.46.1-hadc24fc_0.conda#36f79405ab16bf271edb55b213836dac +https://conda.anaconda.org/conda-forge/linux-64/libsqlite-3.47.0-hadc24fc_0.conda#540296f0ce9d3352188c15a89b30b9ac https://conda.anaconda.org/conda-forge/linux-64/libssh2-1.11.0-h0841786_0.conda#1f5a58e686b13bcfde88b93f547d23fe https://conda.anaconda.org/conda-forge/linux-64/libstdcxx-ng-14.2.0-h4852527_1.conda#8371ac6457591af2cf6159439c1fd051 https://conda.anaconda.org/conda-forge/linux-64/libuuid-2.38.1-h0b41bf4_0.conda#40b61aab5c7ba9ff276c41cfffe6b80b @@ -76,7 +76,7 @@ https://conda.anaconda.org/conda-forge/linux-64/icu-75.1-he02047a_0.conda#8b1893 https://conda.anaconda.org/conda-forge/linux-64/lerc-4.0.0-h27087fc_0.tar.bz2#76bbff344f0134279f225174e9064c8f https://conda.anaconda.org/conda-forge/linux-64/libedit-3.1.20191231-he28a2e2_2.tar.bz2#4d331e44109e3f0e19b4cb8f9b82f3e1 https://conda.anaconda.org/conda-forge/linux-64/libgfortran-ng-14.2.0-h69a702a_1.conda#0a7f4cd238267c88e5d69f7826a407eb -https://conda.anaconda.org/conda-forge/linux-64/libnghttp2-1.58.0-h47da74e_1.conda#700ac6ea6d53d5510591c4344d5c989a +https://conda.anaconda.org/conda-forge/linux-64/libnghttp2-1.64.0-h161d5f1_0.conda#19e57602824042dfd0446292ef90488b https://conda.anaconda.org/conda-forge/linux-64/pcre2-10.44-hba22ea6_2.conda#df359c09c41cd186fffb93a2d87aa6f5 https://conda.anaconda.org/conda-forge/linux-64/pixman-0.43.2-h59595ed_0.conda#71004cbf7924e19c02746ccde9fd7123 https://conda.anaconda.org/conda-forge/linux-64/readline-8.2-h8228510_1.conda#47d31b792659ce70f470b5c82fdfb7a4 @@ -89,7 +89,7 @@ https://conda.anaconda.org/conda-forge/linux-64/gfortran_impl_linux-64-14.2.0-hc https://conda.anaconda.org/conda-forge/linux-64/gxx_impl_linux-64-14.2.0-h2c03514_1.conda#41664acd4c99ef4d192e12950ff68ca6 https://conda.anaconda.org/conda-forge/linux-64/krb5-1.21.3-h659f571_0.conda#3f43953b7d3fb3aaa1d0d0723d91e368 https://conda.anaconda.org/conda-forge/linux-64/libglib-2.82.2-h2ff4ddf_0.conda#13e8e54035ddd2b91875ba399f0f7c04 -https://conda.anaconda.org/conda-forge/linux-64/libopenblas-0.3.27-pthreads_hac2b453_1.conda#ae05ece66d3924ac3d48b4aa3fa96cec +https://conda.anaconda.org/conda-forge/linux-64/libopenblas-0.3.28-pthreads_h94d23a6_0.conda#9ebc9aedafaa2515ab247ff6bb509458 https://conda.anaconda.org/conda-forge/linux-64/libtiff-4.7.0-he137b08_1.conda#63872517c98aa305da58a757c443698e https://conda.anaconda.org/conda-forge/linux-64/libxml2-2.12.7-he7c6b58_4.conda#08a9265c637230c37cb1be4a6cad4536 https://conda.anaconda.org/conda-forge/linux-64/python-3.13.0-h9ebbce0_100_cp313.conda#08e9aef080f33daeb192b2ddc7e4721f @@ -99,7 +99,7 @@ https://conda.anaconda.org/conda-forge/linux-64/xorg-libxrender-0.9.11-hb9d3cd8_ https://conda.anaconda.org/conda-forge/linux-64/xorg-libxt-1.3.0-hb9d3cd8_2.conda#d8602724ac0d276c380b97e9eb0f814b https://conda.anaconda.org/conda-forge/noarch/argcomplete-3.5.1-pyhd8ed1ab_0.conda#f1f7b435e0e99368020f21447e477b70 https://conda.anaconda.org/conda-forge/linux-64/cairo-1.18.0-hebfffa5_3.conda#fceaedf1cdbcb02df9699a0d9b005292 -https://conda.anaconda.org/conda-forge/linux-64/libblas-3.9.0-24_linux64_openblas.conda#80aea6603a6813b16ec119d00382b772 +https://conda.anaconda.org/conda-forge/linux-64/libblas-3.9.0-25_linux64_openblas.conda#8ea26d42ca88ec5258802715fe1ee10b https://conda.anaconda.org/conda-forge/linux-64/libcurl-8.10.1-hbbe4b11_0.conda#6e801c50a40301f6978c53976917b277 https://conda.anaconda.org/conda-forge/linux-64/pyyaml-6.0.2-py313h536fd9c_1.conda#3789f360de131c345e96fbfc955ca80b https://conda.anaconda.org/conda-forge/noarch/setuptools-75.1.0-pyhd8ed1ab_0.conda#d5cd48392c67fb6849ba459c2c2b671f @@ -108,8 +108,8 @@ https://conda.anaconda.org/conda-forge/noarch/tomlkit-0.13.2-pyha770c72_0.conda# https://conda.anaconda.org/conda-forge/noarch/xmltodict-0.14.2-pyhd8ed1ab_0.conda#cf0444b8bf96cb4c8162be3bfbf5b462 https://conda.anaconda.org/conda-forge/linux-64/curl-8.10.1-hbbe4b11_0.conda#73c561c6b84bda71776c9fa21517e7eb https://conda.anaconda.org/conda-forge/linux-64/harfbuzz-9.0.0-hda332d3_1.conda#76b32dcf243444aea9c6b804bcfa40b8 -https://conda.anaconda.org/conda-forge/linux-64/libcblas-3.9.0-24_linux64_openblas.conda#f5b8822297c9c790cec0795ca1fc9be6 -https://conda.anaconda.org/conda-forge/linux-64/liblapack-3.9.0-24_linux64_openblas.conda#fd540578678aefe025705f4b58b36b2e +https://conda.anaconda.org/conda-forge/linux-64/libcblas-3.9.0-25_linux64_openblas.conda#5dbd1b0fc0d01ec5e0e1fbe667281a11 +https://conda.anaconda.org/conda-forge/linux-64/liblapack-3.9.0-25_linux64_openblas.conda#4dc03a53fc69371a6158d0ed37214cd3 https://conda.anaconda.org/conda-forge/noarch/yq-3.4.3-pyhd8ed1ab_0.conda#b5a8334311d5f6751cce8281ab6458d3 https://conda.anaconda.org/conda-forge/linux-64/gsl-2.7-he838d99_0.tar.bz2#fec079ba39c9cca093bf4c00001825de https://conda.anaconda.org/conda-forge/linux-64/pango-1.54.0-h4c5309f_1.conda#7df02e445367703cd87a574046e3a6f0 @@ -158,7 +158,7 @@ https://conda.anaconda.org/conda-forge/noarch/r-labeling-0.4.3-r43hc72bb7e_1.con https://conda.anaconda.org/conda-forge/linux-64/r-lattice-0.22_6-r43hb1dbf0f_1.conda#e42a7ddaeeea0096c4f6df18fb5274e3 https://conda.anaconda.org/conda-forge/linux-64/r-lazyeval-0.2.2-r43hb1dbf0f_5.conda#5332bc619a13ca173a49cb602489a9df https://conda.anaconda.org/conda-forge/noarch/r-listenv-0.9.1-r43hc72bb7e_1.conda#ec5e5ed484ed53445c5ae5debc3f3f53 -https://conda.anaconda.org/conda-forge/linux-64/r-log4r-0.4.3-r43hdb488b9_2.conda#e5739f218d567d11d8069cd4928f7d93 +https://conda.anaconda.org/conda-forge/linux-64/r-log4r-0.4.4-r43h2b5f3a1_0.conda#ef0e5c3ee0843ca17b5864c1d60af46d https://conda.anaconda.org/conda-forge/linux-64/r-lpsolve-5.6.21-r43h2b5f3a1_0.conda#d768d1529ee5ef5862a2777218cb2f5c https://conda.anaconda.org/conda-forge/linux-64/r-magrittr-2.0.3-r43hb1dbf0f_3.conda#fc61bcf37e59037b486c8841a704e9da https://conda.anaconda.org/conda-forge/linux-64/r-mass-7.3_60.0.1-r43hb1dbf0f_1.conda#c3c9184486ccabe19b86aba11351652e @@ -185,7 +185,7 @@ https://conda.anaconda.org/conda-forge/linux-64/r-rjson-0.2.23-r43h93ab643_0.con https://conda.anaconda.org/conda-forge/linux-64/r-rlang-1.1.4-r43ha18555a_1.conda#e9f6f76e66306bd6483935ad4c79ac28 https://conda.anaconda.org/conda-forge/linux-64/r-rpart-4.1.23-r43hb1dbf0f_1.conda#3a1bacb9094110d6c25c39daed36f3fc https://conda.anaconda.org/conda-forge/linux-64/r-rrapply-1.2.7-r43hdb488b9_1.conda#c56e9ae3f690cebeda18215b91ce06cb -https://conda.anaconda.org/conda-forge/noarch/r-rstudioapi-0.16.0-r43hc72bb7e_1.conda#bf49fab78ca6311b4e74f5cc7e72880b +https://conda.anaconda.org/conda-forge/noarch/r-rstudioapi-0.17.1-r43hc72bb7e_0.conda#94a2efa5a76ae146730e2e35a8efa0ad https://conda.anaconda.org/conda-forge/noarch/r-shape-1.4.6.1-r43ha770c72_1.conda#f3dc2930e4ff73b8913f773988fe47a9 https://conda.anaconda.org/conda-forge/noarch/r-snow-0.4_4-r43hc72bb7e_3.conda#60eeeef67921f38a80c1778eae3bbbb9 https://conda.anaconda.org/conda-forge/linux-64/r-sourcetools-0.1.7_1-r43ha18555a_2.conda#ac984cdfeb93aecef6e2d5942a6d9ab3 @@ -326,5 +326,5 @@ https://conda.anaconda.org/bioconda/noarch/bioconductor-bsgenome.hsapiens.ucsc.h https://conda.anaconda.org/bioconda/noarch/bioconductor-genomicfeatures-1.54.1-r43hdfd78af_0.tar.bz2#445ea419486180673fffc192b5fe8edb https://conda.anaconda.org/bioconda/linux-64/bioconductor-variantannotation-1.48.1-r43ha9d7317_1.tar.bz2#01c0b8e76583c3f8872e3181dd06ffbd https://conda.anaconda.org/bioconda/noarch/bioconductor-mutationalpatterns-3.12.0-r43hdfd78af_0.tar.bz2#d22030798f7d464ddb092e4651625210 -https://conda.anaconda.org/pcgr/noarch/r-pcgrr-2.1.2-r43_0.tar.bz2#5234839781a3fe367caae963474d4f5a +https://conda.anaconda.org/pcgr/noarch/r-pcgrr-2.1.2.9001-r43_0.tar.bz2#56d648d7e6d73bc3dd67251bed9874b1 https://conda.anaconda.org/pcgr/noarch/r-cpsr-2.1.2-r43_0.tar.bz2#085cb4c48df0f09f88a0ae8188cfe563 diff --git a/conda/env/lock/pcgrr-osx-64.lock b/conda/env/lock/pcgrr-osx-64.lock index 251bde7d..540961cd 100644 --- a/conda/env/lock/pcgrr-osx-64.lock +++ b/conda/env/lock/pcgrr-osx-64.lock @@ -1,6 +1,6 @@ # Generated by conda-lock. # platform: osx-64 -# input_hash: c0a1235cb60be9f23ecb2aadfb8ecb5dce6ded7345cfe07756a05c927e00653f +# input_hash: 1e6637a6ddc9e11e9f99c1091400db47799030b74c856155da962c5d8453766d @EXPLICIT https://conda.anaconda.org/conda-forge/noarch/_r-mutex-1.0.1-anacondar_1.tar.bz2#19f9db5f4f1b7f5ef5f6d67207f25f38 https://conda.anaconda.org/conda-forge/osx-64/ca-certificates-2024.8.30-h8857fd0_0.conda#b7e5424e7f06547a903d28e4651dbb21 @@ -53,9 +53,9 @@ https://conda.anaconda.org/conda-forge/osx-64/libcxx-devel-19.1.2-h7c275be_0.con https://conda.anaconda.org/conda-forge/osx-64/libedit-3.1.20191231-h0678c8f_2.tar.bz2#6016a8a1d0e63cac3de2c352cd40208b https://conda.anaconda.org/conda-forge/osx-64/libgettextpo-0.22.5-hdfe23c8_3.conda#ba6eeccaee150e24a544be8ae71aeca1 https://conda.anaconda.org/conda-forge/osx-64/libgfortran5-13.2.0-h2873a65_3.conda#e4fb4d23ec2870ff3c40d10afe305aec -https://conda.anaconda.org/conda-forge/osx-64/libnghttp2-1.58.0-h64cf6d3_1.conda#faecc55c2a8155d9ff1c0ff9a0fef64f +https://conda.anaconda.org/conda-forge/osx-64/libnghttp2-1.64.0-hc7306c3_0.conda#ab21007194b97beade22ceb7a3f6fee5 https://conda.anaconda.org/conda-forge/osx-64/libpng-1.6.44-h4b8f8c9_0.conda#f32ac2c8dd390dbf169f550887ed09d9 -https://conda.anaconda.org/conda-forge/osx-64/libsqlite-3.46.1-h4b8f8c9_0.conda#84de0078b58f899fc164303b0603ff0e +https://conda.anaconda.org/conda-forge/osx-64/libsqlite-3.47.0-h2f8c449_0.conda#9dbe833ae53f6756fd87e32bd5fa508e https://conda.anaconda.org/conda-forge/osx-64/libssh2-1.11.0-hd019ec5_0.conda#ca3a72efba692c59a90d4b9fc0dfe774 https://conda.anaconda.org/conda-forge/osx-64/libxml2-2.12.7-heaf3512_4.conda#ea1be6ecfe814da889e882c8b6ead79d https://conda.anaconda.org/conda-forge/osx-64/pcre2-10.44-h7634a1b_2.conda#58cde0663f487778bcd7a0c8daf50293 @@ -82,7 +82,7 @@ https://conda.anaconda.org/conda-forge/osx-64/fontconfig-2.14.2-h5bb23bf_0.conda https://conda.anaconda.org/conda-forge/osx-64/ld64_osx-64-951.9-h3c7722d_1.conda#037fbd1bbc7873f53bf23d0cc3057d90 https://conda.anaconda.org/conda-forge/osx-64/libclang-cpp19.1-19.1.2-default_hed3c1ff_1.conda#853eea82ab64ab384457f61916c21659 https://conda.anaconda.org/conda-forge/osx-64/libcurl-8.10.1-h58e7537_0.conda#6c8669d8228a2bbd0283911cc6d6726e -https://conda.anaconda.org/conda-forge/osx-64/libopenblas-0.3.27-openmp_h8869122_1.conda#c0798ad76ddd730dade6ff4dff66e0b5 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