diff --git a/README.md b/README.md index f2f6354..bde33be 100644 --- a/README.md +++ b/README.md @@ -1,15 +1,16 @@ # smoc-schema -Metadata schema for the SMOC Multi-Omics Digital Object +Metadata schema for the SMOC Multi-Omics Digital Object. ```mermaid erDiagram -StudyCollection { +MODOCollection { } -Study { - datetime start_date - datetime completion_date +MODO { + datetime creation_date + datetime last_update_date + uri source_uri uriorcurie id string name string description @@ -21,16 +22,17 @@ Assay { string description } DataEntity { - uri location + string data_path DataFormat data_format uriorcurie id string name string description } ReferenceGenome { - uri location + string data_path integerList taxon_id uri source_uri + string version uriorcurie id string name string description @@ -38,11 +40,15 @@ ReferenceGenome { ReferenceSequence { string sequence_md5 uri source_uri + string version uriorcurie id string name string description } Sample { + string cell_type + string source_material + Sex sex integerList taxon_id stringList collector uriorcurie id @@ -50,16 +56,18 @@ Sample { string description } -StudyCollection ||--}o Study : "entries" -Study ||--}o Assay : "has_assay" +MODOCollection ||--}o MODO : "entries" +MODO ||--}o Assay : "has_assay" Assay ||--}o Sample : "has_sample" Assay ||--}o DataEntity : "has_data" DataEntity ||--}o Sample : "has_sample" DataEntity ||--|o ReferenceGenome : "has_reference" ReferenceGenome ||--}o ReferenceSequence : "has_sequence" + ``` + ## Website [https://sdsc-ordes.github.io/smoc-schema](https://sdsc-ordes.github.io/smoc-schema)