diff --git a/Containerfile b/Containerfile new file mode 100644 index 00000000..633f07e5 --- /dev/null +++ b/Containerfile @@ -0,0 +1,13 @@ +FROM ubi8:latest + +RUN yum update \ + && yum install -y python3-pip python3-devel pigz \ + && cd /usr/local/bin \ + && ln -s /usr/bin/python3 python \ + && pip3 --no-cache-dir install --upgrade pip \ + && yum clean all \ + && echo "system packages installed" + +RUN python -m pip install pysam + +WORKDIR /opt/