From 0bc8c78c7a8f0bbf50241d85e49a57dad4b3dd1b Mon Sep 17 00:00:00 2001
From: "pre-commit-ci[bot]"
 <66853113+pre-commit-ci[bot]@users.noreply.github.com>
Date: Mon, 7 Oct 2024 20:38:49 +0000
Subject: [PATCH 1/2] [pre-commit.ci] pre-commit autoupdate
MIME-Version: 1.0
Content-Type: text/plain; charset=UTF-8
Content-Transfer-Encoding: 8bit

updates:
- [github.com/Lucas-C/pre-commit-hooks: v1.2.0 → v1.5.5](https://github.com/Lucas-C/pre-commit-hooks/compare/v1.2.0...v1.5.5)
- [github.com/pre-commit/pre-commit-hooks: v4.2.0 → v5.0.0](https://github.com/pre-commit/pre-commit-hooks/compare/v4.2.0...v5.0.0)
- [github.com/pycqa/pydocstyle.git: 6.1.1 → 6.3.0](https://github.com/pycqa/pydocstyle.git/compare/6.1.1...6.3.0)
- [github.com/pre-commit/pre-commit-hooks: v4.2.0 → v5.0.0](https://github.com/pre-commit/pre-commit-hooks/compare/v4.2.0...v5.0.0)
- [github.com/psf/black: 22.3.0 → 24.10.0](https://github.com/psf/black/compare/22.3.0...24.10.0)
- [github.com/s-weigand/flake8-nb: v0.4.0 → v0.5.3](https://github.com/s-weigand/flake8-nb/compare/v0.4.0...v0.5.3)
---
 .pre-commit-config.yaml | 12 ++++++------
 1 file changed, 6 insertions(+), 6 deletions(-)

diff --git a/.pre-commit-config.yaml b/.pre-commit-config.yaml
index 53ca0d9..351a3e0 100644
--- a/.pre-commit-config.yaml
+++ b/.pre-commit-config.yaml
@@ -1,12 +1,12 @@
 ---
 repos:
   - repo: https://github.com/Lucas-C/pre-commit-hooks
-    rev: v1.2.0
+    rev: v1.5.5
     hooks:
       - id: remove-tabs
 
   - repo: https://github.com/pre-commit/pre-commit-hooks
-    rev: v4.2.0
+    rev: v5.0.0
     hooks:
       - id: trailing-whitespace
       - id: check-merge-conflict
@@ -22,12 +22,12 @@ repos:
       - id: debug-statements
 
   - repo: https://github.com/pycqa/pydocstyle.git
-    rev: 6.1.1
+    rev: 6.3.0
     hooks:
       - id: pydocstyle
 
   - repo: https://github.com/pre-commit/pre-commit-hooks
-    rev: v4.2.0
+    rev: v5.0.0
     hooks:
       - id: check-toml
       - id: check-yaml
@@ -35,7 +35,7 @@ repos:
       - id: trailing-whitespace
 
   - repo: https://github.com/psf/black
-    rev: 22.3.0
+    rev: 24.10.0
     hooks:
       - id: black
 
@@ -46,7 +46,7 @@ repos:
   #     - id: check-manifest
 
   - repo: https://github.com/s-weigand/flake8-nb
-    rev: v0.4.0
+    rev: v0.5.3
     hooks:
       - id: flake8-nb
         additional_dependencies: ['pep8-naming']

From 4300489faab6792db8384485638c675f0b9554ed Mon Sep 17 00:00:00 2001
From: "pre-commit-ci[bot]"
 <66853113+pre-commit-ci[bot]@users.noreply.github.com>
Date: Mon, 7 Oct 2024 20:40:36 +0000
Subject: [PATCH 2/2] [pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci
---
 notebooks/demo2/cascade_mask_rcnn_hrnetv2p_w32_20e_v2.py   | 1 +
 notebooks/demo2/config.py                                  | 1 +
 notebooks/demo2/config_farm_train.py                       | 1 -
 src/components/preprocessing/base_component.py             | 1 -
 src/components/preprocessing/base_curator.py               | 1 -
 src/components/preprocessing/base_kpi_inference_curator.py | 2 +-
 src/components/preprocessing/curator.py                    | 1 -
 src/components/preprocessing/extractor.py                  | 1 -
 src/components/preprocessing/kpi_inference_curator.py      | 1 +
 src/components/preprocessing/nq_curator.py                 | 1 -
 src/components/preprocessing/nq_extractor.py               | 1 -
 src/components/preprocessing/pdf_table_extractor.py        | 1 -
 src/components/preprocessing/pdf_text_extractor.py         | 1 -
 src/components/preprocessing/text_curator.py               | 1 -
 src/components/utils/cscdtabnet_checkpoint_url.py          | 1 -
 src/components/utils/nq_utils.py                           | 1 -
 src/components/utils/qa_metrics.py                         | 1 -
 src/data/__init__.py                                       | 1 +
 src/data/make_dataset.py                                   | 1 +
 src/data/s3_communication.py                               | 1 +
 src/models/__init__.py                                     | 1 +
 src/models/farm_trainer.py                                 | 1 -
 src/models/qa_farm_trainer.py                              | 1 -
 src/models/relevance_infer.py                              | 1 -
 src/models/text_kpi_infer.py                               | 7 +++----
 25 files changed, 11 insertions(+), 21 deletions(-)

diff --git a/notebooks/demo2/cascade_mask_rcnn_hrnetv2p_w32_20e_v2.py b/notebooks/demo2/cascade_mask_rcnn_hrnetv2p_w32_20e_v2.py
index 44c8d2a..65c5fa5 100644
--- a/notebooks/demo2/cascade_mask_rcnn_hrnetv2p_w32_20e_v2.py
+++ b/notebooks/demo2/cascade_mask_rcnn_hrnetv2p_w32_20e_v2.py
@@ -1,4 +1,5 @@
 """Model settings."""
+
 model = dict(
     type="CascadeRCNN",
     # num_stages=3,
diff --git a/notebooks/demo2/config.py b/notebooks/demo2/config.py
index 579f042..b27dc2e 100644
--- a/notebooks/demo2/config.py
+++ b/notebooks/demo2/config.py
@@ -1,4 +1,5 @@
 """Default runtime config."""
+
 import pathlib
 import os
 import yaml
diff --git a/notebooks/demo2/config_farm_train.py b/notebooks/demo2/config_farm_train.py
index 4ad608e..37234bf 100755
--- a/notebooks/demo2/config_farm_train.py
+++ b/notebooks/demo2/config_farm_train.py
@@ -1,6 +1,5 @@
 """Config FARM Training."""
 
-
 import pathlib
 import os
 from farm.modeling.prediction_head import TextClassificationHead
diff --git a/src/components/preprocessing/base_component.py b/src/components/preprocessing/base_component.py
index 398d00b..79ba892 100755
--- a/src/components/preprocessing/base_component.py
+++ b/src/components/preprocessing/base_component.py
@@ -1,6 +1,5 @@
 """BaseComponent."""
 
-
 from abc import ABC, abstractmethod
 
 
diff --git a/src/components/preprocessing/base_curator.py b/src/components/preprocessing/base_curator.py
index 70f23c2..a9eced5 100755
--- a/src/components/preprocessing/base_curator.py
+++ b/src/components/preprocessing/base_curator.py
@@ -1,6 +1,5 @@
 """BaseCurator."""
 
-
 import re
 from abc import abstractmethod
 
diff --git a/src/components/preprocessing/base_kpi_inference_curator.py b/src/components/preprocessing/base_kpi_inference_curator.py
index 1a2e2ae..e1c73ea 100644
--- a/src/components/preprocessing/base_kpi_inference_curator.py
+++ b/src/components/preprocessing/base_kpi_inference_curator.py
@@ -197,7 +197,7 @@ def return_sliced_squad(self, squad_json, indices):
             return {}
 
         pdf2pars = defaultdict(list)
-        for (i1, i2) in indices:
+        for i1, i2 in indices:
             pdf2pars[i1].append(i2)
 
         data = []
diff --git a/src/components/preprocessing/curator.py b/src/components/preprocessing/curator.py
index 3b4e519..de73da0 100755
--- a/src/components/preprocessing/curator.py
+++ b/src/components/preprocessing/curator.py
@@ -1,6 +1,5 @@
 """Curator."""
 
-
 import glob
 import logging
 
diff --git a/src/components/preprocessing/extractor.py b/src/components/preprocessing/extractor.py
index 04f13d0..f0c8011 100755
--- a/src/components/preprocessing/extractor.py
+++ b/src/components/preprocessing/extractor.py
@@ -1,6 +1,5 @@
 """Extractor class."""
 
-
 from .pdf_table_extractor import PDFTableExtractor
 from .pdf_text_extractor import PDFTextExtractor
 import logging
diff --git a/src/components/preprocessing/kpi_inference_curator.py b/src/components/preprocessing/kpi_inference_curator.py
index 4b4b72f..b9da5af 100644
--- a/src/components/preprocessing/kpi_inference_curator.py
+++ b/src/components/preprocessing/kpi_inference_curator.py
@@ -103,6 +103,7 @@ def clean(self, df):
         Args:
             df (A pandas dataframe)
         """
+
         # map kpi to question
         def map_kpi(r):
             try:
diff --git a/src/components/preprocessing/nq_curator.py b/src/components/preprocessing/nq_curator.py
index 794fee7..4fb01b5 100755
--- a/src/components/preprocessing/nq_curator.py
+++ b/src/components/preprocessing/nq_curator.py
@@ -1,6 +1,5 @@
 """Processing nq curator."""
 
-
 import logging
 import os
 from ast import literal_eval
diff --git a/src/components/preprocessing/nq_extractor.py b/src/components/preprocessing/nq_extractor.py
index 8bb0955..9ecb36f 100755
--- a/src/components/preprocessing/nq_extractor.py
+++ b/src/components/preprocessing/nq_extractor.py
@@ -1,6 +1,5 @@
 """NQExtractor."""
 
-
 import json
 import logging
 import os
diff --git a/src/components/preprocessing/pdf_table_extractor.py b/src/components/preprocessing/pdf_table_extractor.py
index 843ff1a..7b262c6 100755
--- a/src/components/preprocessing/pdf_table_extractor.py
+++ b/src/components/preprocessing/pdf_table_extractor.py
@@ -1,6 +1,5 @@
 """PDFTableExtractor."""
 
-
 from .base_component import BaseComponent
 import os
 from pdf2image import convert_from_path, pdfinfo_from_path
diff --git a/src/components/preprocessing/pdf_text_extractor.py b/src/components/preprocessing/pdf_text_extractor.py
index debf29e..19dba44 100755
--- a/src/components/preprocessing/pdf_text_extractor.py
+++ b/src/components/preprocessing/pdf_text_extractor.py
@@ -1,6 +1,5 @@
 """PDFTextExtractor."""
 
-
 import glob
 import io
 import json
diff --git a/src/components/preprocessing/text_curator.py b/src/components/preprocessing/text_curator.py
index 2c337fe..c33aff5 100755
--- a/src/components/preprocessing/text_curator.py
+++ b/src/components/preprocessing/text_curator.py
@@ -1,6 +1,5 @@
 """TextCurator."""
 
-
 import ast
 import json
 import logging
diff --git a/src/components/utils/cscdtabnet_checkpoint_url.py b/src/components/utils/cscdtabnet_checkpoint_url.py
index e2db84a..666a2ea 100755
--- a/src/components/utils/cscdtabnet_checkpoint_url.py
+++ b/src/components/utils/cscdtabnet_checkpoint_url.py
@@ -1,6 +1,5 @@
 """Cscdtabnet checkpoint URLs."""
 
-
 checkpoint_url = {
     "general_model.pth": "https://drive.google.com/uc?id=1-xfq5hDmFdKgbY9FSFTmhSlcb2p13RPn",
     "icdar_13.pth": "https://drive.google.com/uc?id=1-mVr4UBicFk3mjUz5tsVPjQ4jzRtiT7V",
diff --git a/src/components/utils/nq_utils.py b/src/components/utils/nq_utils.py
index 639da39..7d5fe97 100755
--- a/src/components/utils/nq_utils.py
+++ b/src/components/utils/nq_utils.py
@@ -1,6 +1,5 @@
 """NQ utils."""
 
-
 import re
 
 
diff --git a/src/components/utils/qa_metrics.py b/src/components/utils/qa_metrics.py
index f64cd01..a424e53 100755
--- a/src/components/utils/qa_metrics.py
+++ b/src/components/utils/qa_metrics.py
@@ -1,6 +1,5 @@
 """QA metrics."""
 
-
 import numpy as np
 from farm.evaluation.metrics import squad_EM, squad_f1
 from sklearn.metrics import confusion_matrix
diff --git a/src/data/__init__.py b/src/data/__init__.py
index 7cf612e..2aa025b 100644
--- a/src/data/__init__.py
+++ b/src/data/__init__.py
@@ -1,2 +1,3 @@
 """Data collection module."""
+
 from .s3_communication import S3FileType, S3Communication  # noqa F401
diff --git a/src/data/make_dataset.py b/src/data/make_dataset.py
index 60ed23b..758967f 100644
--- a/src/data/make_dataset.py
+++ b/src/data/make_dataset.py
@@ -1,4 +1,5 @@
 """Data collection code."""
+
 import click
 import logging
 from pathlib import Path
diff --git a/src/data/s3_communication.py b/src/data/s3_communication.py
index 82df3d3..dc6ed18 100644
--- a/src/data/s3_communication.py
+++ b/src/data/s3_communication.py
@@ -1,4 +1,5 @@
 """S3 communication tools."""
+
 import os
 import pathlib
 import os.path as osp
diff --git a/src/models/__init__.py b/src/models/__init__.py
index c8ba266..a8e69d3 100644
--- a/src/models/__init__.py
+++ b/src/models/__init__.py
@@ -1,4 +1,5 @@
 """Module for models."""
+
 from .farm_trainer import FARMTrainer
 from .qa_farm_trainer import QAFARMTrainer
 from .trainer_optuna import TrainerOptuna
diff --git a/src/models/farm_trainer.py b/src/models/farm_trainer.py
index 9dfab98..647f55c 100755
--- a/src/models/farm_trainer.py
+++ b/src/models/farm_trainer.py
@@ -1,6 +1,5 @@
 """FARM Trainer."""
 
-
 import logging
 import os
 
diff --git a/src/models/qa_farm_trainer.py b/src/models/qa_farm_trainer.py
index 908f902..420d116 100755
--- a/src/models/qa_farm_trainer.py
+++ b/src/models/qa_farm_trainer.py
@@ -1,6 +1,5 @@
 """QA Farm trainer."""
 
-
 import logging
 import json
 import os
diff --git a/src/models/relevance_infer.py b/src/models/relevance_infer.py
index 79855e9..4c67358 100755
--- a/src/models/relevance_infer.py
+++ b/src/models/relevance_infer.py
@@ -1,6 +1,5 @@
 """RelevanceInfer."""
 
-
 import json
 import logging
 import os
diff --git a/src/models/text_kpi_infer.py b/src/models/text_kpi_infer.py
index ee6f7dc..1c66173 100755
--- a/src/models/text_kpi_infer.py
+++ b/src/models/text_kpi_infer.py
@@ -1,6 +1,5 @@
 """Text KPI Inference."""
 
-
 import glob
 import logging
 import os
@@ -61,9 +60,9 @@ def __init__(self, infer_config, n_best_per_sample=1):
         self.model.model.prediction_heads[0].n_best_per_sample = n_best_per_sample
         # If positive, this will boost "No Answer" as prediction.
         # If negative, this will decrease the model from giving "No Answer" as prediction.
-        self.model.model.prediction_heads[
-            0
-        ].no_ans_boost = self.infer_config.no_ans_boost
+        self.model.model.prediction_heads[0].no_ans_boost = (
+            self.infer_config.no_ans_boost
+        )
         self.result_dir = self.infer_config.result_dir["Text"]
         if not os.path.exists(self.result_dir):
             os.makedirs(self.result_dir)