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poetry.lock
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# This file is automatically @generated by Poetry 1.8.4 and should not be changed by hand.
[[package]]
name = "attrs"
version = "24.2.0"
description = "Classes Without Boilerplate"
optional = false
python-versions = ">=3.7"
files = [
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]
[package.extras]
benchmark = ["cloudpickle", "hypothesis", "mypy (>=1.11.1)", "pympler", "pytest (>=4.3.0)", "pytest-codspeed", "pytest-mypy-plugins", "pytest-xdist[psutil]"]
cov = ["cloudpickle", "coverage[toml] (>=5.3)", "hypothesis", "mypy (>=1.11.1)", "pympler", "pytest (>=4.3.0)", "pytest-mypy-plugins", "pytest-xdist[psutil]"]
dev = ["cloudpickle", "hypothesis", "mypy (>=1.11.1)", "pre-commit", "pympler", "pytest (>=4.3.0)", "pytest-mypy-plugins", "pytest-xdist[psutil]"]
docs = ["cogapp", "furo", "myst-parser", "sphinx", "sphinx-notfound-page", "sphinxcontrib-towncrier", "towncrier (<24.7)"]
tests = ["cloudpickle", "hypothesis", "mypy (>=1.11.1)", "pympler", "pytest (>=4.3.0)", "pytest-mypy-plugins", "pytest-xdist[psutil]"]
tests-mypy = ["mypy (>=1.11.1)", "pytest-mypy-plugins"]
[[package]]
name = "babel"
version = "2.16.0"
description = "Internationalization utilities"
optional = false
python-versions = ">=3.8"
files = [
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[package.extras]
dev = ["freezegun (>=1.0,<2.0)", "pytest (>=6.0)", "pytest-cov"]
[[package]]
name = "beautifulsoup4"
version = "4.12.3"
description = "Screen-scraping library"
optional = false
python-versions = ">=3.6.0"
files = [
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[package.dependencies]
soupsieve = ">1.2"
[package.extras]
cchardet = ["cchardet"]
chardet = ["chardet"]
charset-normalizer = ["charset-normalizer"]
html5lib = ["html5lib"]
lxml = ["lxml"]
[[package]]
name = "bioc"
version = "2.1"
description = "bioc - Processing BioC, Brat, and PubTator with Python."
optional = false
python-versions = ">=3.6"
files = [
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[package.dependencies]
docopt = "*"
intervaltree = "*"
jsonlines = ">=1.2.0"
lxml = ">=4.6.3"
tqdm = "*"
[[package]]
name = "certifi"
version = "2024.8.30"
description = "Python package for providing Mozilla's CA Bundle."
optional = false
python-versions = ">=3.6"
files = [
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[[package]]
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colorama = {version = ">=0.4", markers = "platform_system == \"Windows\""}
ghp-import = ">=1.0"
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markupsafe = ">=2.0.1"
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pyyaml = ">=5.1"
pyyaml-env-tag = ">=0.1"
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version = "1.2.0"
description = "Automatically link across pages in MkDocs."
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python-versions = ">=3.8"
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markupsafe = ">=2.0.1"
mkdocs = ">=1.1"
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version = "0.5.0"
description = "MkDocs plugin to programmatically generate documentation pages during the build"
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python-versions = ">=3.7"
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description = "MkDocs extension that lists all dependencies according to a mkdocs.yml file"
optional = false
python-versions = ">=3.8"
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platformdirs = ">=2.2.0"
pyyaml = ">=5.1"
[[package]]
name = "mkdocs-literate-nav"
version = "0.6.1"
description = "MkDocs plugin to specify the navigation in Markdown instead of YAML"
optional = false
python-versions = ">=3.7"
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mkdocs = ">=1.0.3"
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name = "mkdocs-material"
version = "9.5.42"
description = "Documentation that simply works"
optional = false
python-versions = ">=3.8"
files = [
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colorama = ">=0.4,<1.0"
jinja2 = ">=3.0,<4.0"
markdown = ">=3.2,<4.0"
mkdocs = ">=1.6,<2.0"
mkdocs-material-extensions = ">=1.3,<2.0"
paginate = ">=0.5,<1.0"
pygments = ">=2.16,<3.0"
pymdown-extensions = ">=10.2,<11.0"
regex = ">=2022.4"
requests = ">=2.26,<3.0"
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git = ["mkdocs-git-committers-plugin-2 (>=1.1,<2.0)", "mkdocs-git-revision-date-localized-plugin (>=1.2.4,<2.0)"]
imaging = ["cairosvg (>=2.6,<3.0)", "pillow (>=10.2,<11.0)"]
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name = "mkdocs-material-extensions"
version = "1.3.1"
description = "Extension pack for Python Markdown and MkDocs Material."
optional = false
python-versions = ">=3.8"
files = [
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name = "mkdocs-section-index"
version = "0.3.9"
description = "MkDocs plugin to allow clickable sections that lead to an index page"
optional = false
python-versions = ">=3.8"
files = [
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mkdocs = ">=1.2"
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name = "mkdocstrings"
version = "0.26.2"
description = "Automatic documentation from sources, for MkDocs."
optional = false
python-versions = ">=3.9"
files = [
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Markdown = ">=3.6"
MarkupSafe = ">=1.1"
mkdocs = ">=1.4"
mkdocs-autorefs = ">=1.2"
platformdirs = ">=2.2"
pymdown-extensions = ">=6.3"
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crystal = ["mkdocstrings-crystal (>=0.3.4)"]
python = ["mkdocstrings-python (>=0.5.2)"]
python-legacy = ["mkdocstrings-python-legacy (>=0.2.1)"]
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name = "mkdocstrings-python"
version = "1.12.2"
description = "A Python handler for mkdocstrings."
optional = false
python-versions = ">=3.9"
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mkdocs-autorefs = ">=1.2"
mkdocstrings = ">=0.26"
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name = "networkx"
version = "3.4.2"