how to set temporary home directory

[ahmedabbas811]

Hello,

I am trying to run HiC-Pro on a cluster (slurm environment)

I type:
HiC-Pro -i ./H3K27ac_rep2 -o ./Out_dir -c ./config.txt

It gives the following error:

Starting HiC-Pro 3.1.0 via Singularity
No temporary home directory set. Using /home2 for your home directory.
Error - Hi-C config file '/home2/s206442/config.txt' not found

How to change the temporary home directory to the current directory?

Thanks

[nservant]

I do not think that this message is sent by HiCPro itself ... I think this is more related to singularity and its configuration. I would advice to explore the singularity options ...