mkdocs.yml

site_name: VAMBN
theme:
  name: material
  logo: vambn-icon.png
  favicon: vambn-icon.png
  palette:
    primary: "teal"
    accent: "lime"

nav:
  - Home: index.md
  - VAMBN: vambn.md
  - Setup: setup.md
  - Walkthrough: walkthrough.md
  - Configuration: configuration.md
  - TroubleShooting: troubleshooting.md
  - Python Reference:
      - Introduction: python.md
      - API Reference:
          - Data: api/data.md
          - Metrics: api/metrics.md
          - Modelling:
              - Distributions: api/modelling/distributions.md
              - Models:
                  - HIVAE: api/modelling/models/hivae.md
              - MTL: api/modelling/mtl.md
          - Utilities: api/utils.md
          - Visualization: api/visualization.md
  - R Reference: r.md

markdown_extensions:
  - pymdownx.superfences
  - pymdownx.highlight

plugins:
- search
- mkdocstrings:
    handlers:
      python:
        paths: [.]
        options:
          docstring_style: google
          allow_inspection: true
          show_submodules: true

markdown_extensions:
  - toc:
      permalink: true