From 6c94332bf1ba3738e39c80031f6d83436a4832b4 Mon Sep 17 00:00:00 2001
From: Johannes Alneberg <johannes.alneberg@scilifelab.se>
Date: Wed, 20 Mar 2024 09:16:32 +0100
Subject: [PATCH] grop instead of project in a single place

Co-authored-by: Adrien Coulier <adrien.coulier@medsci.uu.se>
---
 subworkflows/local/utils_nfcore_seqinspector_pipeline/main.nf | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/subworkflows/local/utils_nfcore_seqinspector_pipeline/main.nf b/subworkflows/local/utils_nfcore_seqinspector_pipeline/main.nf
index e1f8e4d..cdbb640 100644
--- a/subworkflows/local/utils_nfcore_seqinspector_pipeline/main.nf
+++ b/subworkflows/local/utils_nfcore_seqinspector_pipeline/main.nf
@@ -84,7 +84,7 @@ workflow PIPELINE_INITIALISATION {
         .fromSamplesheet("input") // Validates samplesheet against $projectDir/assets/schema_input.json. Path to validation schema is defined by $projectDir/nextflow_schema.json
         .map {
             meta, fastq_1, fastq_2 ->
-                def id_string = "${meta.sample}_${meta.group ?: "ungrouped"}_${meta.lane}"
+                def id_string = "${meta.sample}_${meta.project ?: "ungrouped"}_${meta.lane}"
                 def updated_meta = meta + [ id: id_string ]
                 if (!fastq_2) {
                     return [ updated_meta.id, updated_meta + [ single_end:true ], [ fastq_1 ] ]