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modules.json
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modules.json
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{
"name": "nf-core/scrnaseq",
"homePage": "https://github.com/nf-core/scrnaseq",
"repos": {
"https://github.com/nf-core/modules.git": {
"modules": {
"nf-core": {
"cellbender/removebackground": {
"branch": "master",
"git_sha": "06c8865e36741e05ad32ef70ab3fac127486af48",
"installed_by": ["modules"]
},
"cellranger/count": {
"branch": "master",
"git_sha": "90dad5491658049282ceb287a3d7732c1ce39837",
"installed_by": ["modules"]
},
"cellranger/mkgtf": {
"branch": "master",
"git_sha": "90dad5491658049282ceb287a3d7732c1ce39837",
"installed_by": ["modules"]
},
"cellranger/mkref": {
"branch": "master",
"git_sha": "3549a361ce3401b6afd238a266389d78392a53f6",
"installed_by": ["modules"]
},
"cellranger/mkvdjref": {
"branch": "master",
"git_sha": "e66183d2ab6a5c2f3fd66b2bee942287cf65536c",
"installed_by": ["modules"]
},
"cellranger/multi": {
"branch": "master",
"git_sha": "90dad5491658049282ceb287a3d7732c1ce39837",
"installed_by": ["modules"]
},
"cellrangerarc/count": {
"branch": "master",
"git_sha": "18e53e27cfeca5dbbfbeee675c05438dec68245f",
"installed_by": ["modules"]
},
"cellrangerarc/mkgtf": {
"branch": "master",
"git_sha": "575e1bc54b083fb15e7dd8b5fcc40bea60e8ce83",
"installed_by": ["modules"]
},
"cellrangerarc/mkref": {
"branch": "master",
"git_sha": "3549a361ce3401b6afd238a266389d78392a53f6",
"installed_by": ["modules"]
},
"fastqc": {
"branch": "master",
"git_sha": "666652151335353eef2fcd58880bcef5bc2928e1",
"installed_by": ["modules"]
},
"gffread": {
"branch": "master",
"git_sha": "b1b959609bda44341120aed1766329909f54b8d0",
"installed_by": ["modules"]
},
"gunzip": {
"branch": "master",
"git_sha": "4e5f4687318f24ba944a13609d3ea6ebd890737d",
"installed_by": ["modules"]
},
"kallistobustools/count": {
"branch": "master",
"git_sha": "53c2b466994f07def210b7f4cc866bb5a8a2cb92",
"installed_by": ["modules"]
},
"kallistobustools/ref": {
"branch": "master",
"git_sha": "de8215983defba48cd81961d620a9e844f11c7e7",
"installed_by": ["modules"]
},
"multiqc": {
"branch": "master",
"git_sha": "cf17ca47590cc578dfb47db1c2a44ef86f89976d",
"installed_by": ["modules"]
},
"star/genomegenerate": {
"branch": "master",
"git_sha": "46eca555142d6e597729fcb682adcc791796f514",
"installed_by": ["modules"]
},
"unzip": {
"branch": "master",
"git_sha": "b0c3ff2485534c09d9debbf20125d9c6b72ce118",
"installed_by": ["modules"]
}
}
},
"subworkflows": {
"nf-core": {
"utils_nextflow_pipeline": {
"branch": "master",
"git_sha": "3aa0aec1d52d492fe241919f0c6100ebf0074082",
"installed_by": ["subworkflows"]
},
"utils_nfcore_pipeline": {
"branch": "master",
"git_sha": "1b6b9a3338d011367137808b49b923515080e3ba",
"installed_by": ["subworkflows"]
},
"utils_nfschema_plugin": {
"branch": "master",
"git_sha": "bbd5a41f4535a8defafe6080e00ea74c45f4f96c",
"installed_by": ["subworkflows"]
}
}
}
}
}
}