From 83c2c8a0148ee82035a9a17d725dc0aa3522a9d8 Mon Sep 17 00:00:00 2001 From: Edmund Miller Date: Mon, 23 Dec 2024 11:09:43 -0600 Subject: [PATCH] build: Lock down python version in PINTS --- modules/nf-core/pints/caller/environment.yml | 1 + modules/nf-core/pints/caller/pints-caller.diff | 15 +++++++++++++-- 2 files changed, 14 insertions(+), 2 deletions(-) diff --git a/modules/nf-core/pints/caller/environment.yml b/modules/nf-core/pints/caller/environment.yml index 1c29653c..cd1e610d 100644 --- a/modules/nf-core/pints/caller/environment.yml +++ b/modules/nf-core/pints/caller/environment.yml @@ -5,6 +5,7 @@ dependencies: - pybedtools - bedtools - htslib + - python=3.12.6 - pip - pip: # FIXME https://github.com/nf-core/modules/issues/5814 # NOTE PINTS isn't adding conda builds and is a few versions behind. diff --git a/modules/nf-core/pints/caller/pints-caller.diff b/modules/nf-core/pints/caller/pints-caller.diff index 021ca528..75c181e9 100644 --- a/modules/nf-core/pints/caller/pints-caller.diff +++ b/modules/nf-core/pints/caller/pints-caller.diff @@ -1,5 +1,16 @@ -Changes in module 'nf-core/pints/caller' -'modules/nf-core/pints/caller/environment.yml' is unchanged +Changes in component 'nf-core/pints/caller' +Changes in 'pints/caller/environment.yml': +--- modules/nf-core/pints/caller/environment.yml ++++ modules/nf-core/pints/caller/environment.yml +@@ -5,6 +5,7 @@ + - pybedtools + - bedtools + - htslib ++ - python=3.12.6 + - pip + - pip: # FIXME https://github.com/nf-core/modules/issues/5814 + # NOTE PINTS isn't adding conda builds and is a few versions behind. + 'modules/nf-core/pints/caller/meta.yml' is unchanged Changes in 'pints/caller/main.nf': --- modules/nf-core/pints/caller/main.nf