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Unofficial Re-implementation of Patch2Self in MATLAB

  • Only support OLS and Ridge regression

    • Internally solves the corresponding normal equations using mldivide
    • For OLS: beta = (X.' * X) \ (X.' * y); i.e., $$\min_\beta (X^TX)^{-1}X^Ty$$
    • For Ridge regression: beta = (X.' * X + alpha * eye(size(X, 2))) \ (X.' * y); i.e., $$\min_\beta (X^TX + \alpha I)^{-1}X^Ty$$
  • Does not support clip_negative_vals, shift_intensity, verbose (yet)

  • Caution: I haven't thoroughly tested the code. Feel free to try it out and let me know if the performance is equivalent to that of the official implementation.

References

[Fadnavis20] S. Fadnavis, J. Batson, E. Garyfallidis, Patch2Self: Denoising Diffusion MRI with Self-supervised Learning, Advances in Neural Information Processing Systems 33 (2020)

Adopted from

Patch2Self (DIPY)