meta.yaml

{% set name = "tb-profiler" %}
{% set version = "2.6" %}
{% set sha256 = "7c83fec2beb2f1c2d0fc4955fa296bd9757ae01156034656e9428d817b7a64b0" %}

package:
  name: {{name}}
  version: {{version}}

source:
  url: https://github.com/jodyphelan/TBProfiler/archive/v{{version}}.tar.gz
  sha256: '{{sha256}}'

build:
  script: python -m pip install --no-deps --ignore-installed .
  noarch: python
  number: 0

requirements:
  host:
    - python
    - pip
  run:
    - python>=3.6
    - pathogen-profiler>=1.6
    - tqdm
    - git
test:
  imports:
    - tbprofiler
  commands:
    - tb-profiler -h

about:
  home: https://github.com/jodyphelan/TBProfiler
  license: GPL3
  license_file: LICENSE
  summary: Profiling tool for Mycobacterium tuberculosis to detect drug resistance and lineage from WGS data

extra:
  identifiers:
    - doi:10.1186/s13073-019-0650-x