-
Notifications
You must be signed in to change notification settings - Fork 17
New issue
Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.
By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.
Already on GitHub? Sign in to your account
Bioconda recipe for macosx-arm64? #72
Comments
We have macOS ARM binaries here: https://anaconda.org/nanoporetech/parasail-python/files bioconda does not make any aarch64 binaries. |
Hi, |
parasail wheels are python universal. @DoaneAS are you having issue with one of the wheels? |
Correct, issue is with building wheel.
Happy to provide more output if helpful, but here is where I see the error occuring during build:
|
A work around for the time being on macosx-arm64 is to install parasail using homebrew, then:
From this I am able to import the library and run the example code. |
The error
(although I note that the setup.py script appears to download an compile some of these tools, but leaves |
I have automake, autoconf, and libtool installed via brew, however I think the issue is the path brew is using on M1 macs. Brew installs everything into My In any case, after installing parasail via |
The By building parasail outside of the Python package one of the things you are accomplishing is sidestepping all the logic in the FYI, its not that difficult to build the conda package using conda build, if you want the more authentic conda experience. You need only the files from: https://github.com/bioconda/bioconda-recipes/tree/master/recipes/parasail-python and run conda build. |
Can't install parasail-python using conda in a Mac with the arm64 chip - the package is missing from bioconda. I know some bioconda recipes are missing for arm64. Not sure if I should post this here or if someone else has created the bioconda recipes for parasail.
The text was updated successfully, but these errors were encountered: