Variant calling-fai problem

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Hi,

I was trying to test the variant calling pipe. I set up all the input files..I 
am experiencing problem with the index files (fai). The files is there, I also 
try to point to it with the browse funtion and I see it. I added another file 
type (fa.fai) thinking that maybe the extension was the problem but still I 
have the error.

fed

Original issue reported on code.google.com by [email protected] on 20 Oct 2011 at 5:38

Attachments:

• IV_VariantCallingAndAnnotation_101011_fgene1.pipe
• [Screen shot 2011-10-20 at 10.32.20 AM.png](https://storage.googleapis.com/google-code-attachments/informatics/issue-28/comment-0/Screen shot 2011-10-20 at 10.32.20 AM.png)