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This is unfortunately impossible to debug other than with binary search (deleting portions of the ontology until it works..)
uk.ac.manchester.cs.owl.owlapi.OWLAnonymousIndividualImpl cannot be cast to org.semanticweb.owlapi.model.OWLLiteral
java.lang.ClassCastException: uk.ac.manchester.cs.owl.owlapi.OWLAnonymousIndividualImpl cannot be cast to org.semanticweb.owlapi.model.OWLLiteral
at org.geneontology.obographs.owlapi.FromOwl.generateGraph(FromOwl.java:477)
at org.geneontology.obographs.owlapi.FromOwl.generateGraphDocument(FromOwl.java:110)
at org.obolibrary.robot.IOHelper.saveOntologyFile(IOHelper.java:1214)
at org.obolibrary.robot.IOHelper.saveOntology(IOHelper.java:638)
at org.obolibrary.robot.CommandLineHelper.maybeSaveOutput(CommandLineHelper.java:663)
at org.obolibrary.robot.ConvertCommand.execute(ConvertCommand.java:141)
at org.obolibrary.robot.CommandManager.executeCommand(CommandManager.java:248)
at org.obolibrary.robot.CommandManager.execute(CommandManager.java:192)
at org.obolibrary.robot.CommandManager.main(CommandManager.java:139)
at org.obolibrary.robot.CommandLineInterface.main(CommandLineInterface.java:56)
The text was updated successfully, but these errors were encountered:
Yes, the weird thing is though that this line is in a different method than the above error suggests.. I think this might be a problem with obographs version in owlapi/robot..
This is unfortunately impossible to debug other than with binary search (deleting portions of the ontology until it works..)
The text was updated successfully, but these errors were encountered: