From 30cb2471a033192574523c73dd9ddbacee849ddd Mon Sep 17 00:00:00 2001
From: SantaMcCloud <santino_faack@gmx.de>
Date: Fri, 20 Dec 2024 19:48:22 +0100
Subject: [PATCH 1/2] add new datatype

---
 lib/galaxy/config/sample/datatypes_conf.xml.sample | 1 +
 lib/galaxy/datatypes/binary.py                     | 5 +++++
 2 files changed, 6 insertions(+)

diff --git a/lib/galaxy/config/sample/datatypes_conf.xml.sample b/lib/galaxy/config/sample/datatypes_conf.xml.sample
index 89024e5ace7b..9b30e4af2aca 100644
--- a/lib/galaxy/config/sample/datatypes_conf.xml.sample
+++ b/lib/galaxy/config/sample/datatypes_conf.xml.sample
@@ -1017,6 +1017,7 @@
     <datatype extension="fits" type="galaxy.datatypes.binary:FITS" mimetype="application/octet-stream" display_in_upload="true" description="Flexible Image Transport System (FITS) used in Astronomy"/>
     <datatype extension="chain" type="galaxy.datatypes.chain:Chain" display_in_upload="true" description_url="https://genome.ucsc.edu/goldenPath/help/chain.html"/>
     <datatype extension="ucsc.net" type="galaxy.datatypes.chain:Net" display_in_upload="true" description_url="https://genome.ucsc.edu/goldenPath/help/net.html"/>
+    <datatype extension="bcsp" type="galaxy.datatypes.binary:bcsp" display_in_upload="true"/>
   </registration>
   <sniffers>
     <!--
diff --git a/lib/galaxy/datatypes/binary.py b/lib/galaxy/datatypes/binary.py
index f7c0aa365891..f0ea268aaa0d 100644
--- a/lib/galaxy/datatypes/binary.py
+++ b/lib/galaxy/datatypes/binary.py
@@ -4747,3 +4747,8 @@ def display_peek(self, dataset: DatasetProtocol) -> str:
             return dataset.peek
         except Exception:
             return f"Binary numpy file ({nice_size(dataset.get_size())})"
+
+class bcsp(Binary):
+    """Class for a *.bscp file"""
+
+    file_ext = "bcsp"

From 9ead291dadd50c3240d0b773156eb88c15a19fd8 Mon Sep 17 00:00:00 2001
From: SantaMcCloud <santino_faack@gmx.de>
Date: Fri, 20 Dec 2024 23:18:06 +0100
Subject: [PATCH 2/2] rewiev

---
 lib/galaxy/config/sample/datatypes_conf.xml.sample | 2 +-
 lib/galaxy/datatypes/binary.py                     | 5 -----
 2 files changed, 1 insertion(+), 6 deletions(-)

diff --git a/lib/galaxy/config/sample/datatypes_conf.xml.sample b/lib/galaxy/config/sample/datatypes_conf.xml.sample
index 9b30e4af2aca..2ba8e6ceade3 100644
--- a/lib/galaxy/config/sample/datatypes_conf.xml.sample
+++ b/lib/galaxy/config/sample/datatypes_conf.xml.sample
@@ -1017,7 +1017,7 @@
     <datatype extension="fits" type="galaxy.datatypes.binary:FITS" mimetype="application/octet-stream" display_in_upload="true" description="Flexible Image Transport System (FITS) used in Astronomy"/>
     <datatype extension="chain" type="galaxy.datatypes.chain:Chain" display_in_upload="true" description_url="https://genome.ucsc.edu/goldenPath/help/chain.html"/>
     <datatype extension="ucsc.net" type="galaxy.datatypes.chain:Net" display_in_upload="true" description_url="https://genome.ucsc.edu/goldenPath/help/net.html"/>
-    <datatype extension="bcsp" type="galaxy.datatypes.binary:bcsp" display_in_upload="true"/>
+    <datatype extension="bcsp" type="galaxy.datatypes.binary:Binary" mimetype="application/octet-stream" display_in_upload="true" subclass="true"/>
   </registration>
   <sniffers>
     <!--
diff --git a/lib/galaxy/datatypes/binary.py b/lib/galaxy/datatypes/binary.py
index f0ea268aaa0d..f7c0aa365891 100644
--- a/lib/galaxy/datatypes/binary.py
+++ b/lib/galaxy/datatypes/binary.py
@@ -4747,8 +4747,3 @@ def display_peek(self, dataset: DatasetProtocol) -> str:
             return dataset.peek
         except Exception:
             return f"Binary numpy file ({nice_size(dataset.get_size())})"
-
-class bcsp(Binary):
-    """Class for a *.bscp file"""
-
-    file_ext = "bcsp"