readme

msmsEval v1.3 (03-Aug-07)
by Jason W. H. Wong, Cartwright Lab, PTCL, University of Oxford. 2006-7(c)

msmsEval is an application designed to evaluate the quality of tandem mass
spectra from LCn/MS/MS type datasets. Probability values for the likelihood
for a "good" quality spectrum is assigned to each spectrum. Further,
msmsEval can export spectra as DTA files for all spectra with a specified
cut-off probability value.

For more details please refer to the msmsEval website:

http://proteomics.ucd.ie/msmseval

The method on which the application is based has been submitted for
publication in BMC Bioinformatics. If you use this program in your work
please cite:

Wong, J.W.H., Sullivan, M.J., Cartwright, H.M. and Cagney, G. (2007) msmsEval: 
Tandem mass spectral quality assignment for high-throughput proteomics BMC Bioinformatics. 8:51

To compilation/installation instructions see the INSTALL file.

The use of msmsEval is subject to agreement with the terms and 
conditions specified in the LICENSE file distributed with this package. 
Please refer to this file BEFORE using msmsEval.

Please send and comments/bugs to Jason Wong <jason.wong@ucd.ie>