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optslope

A toolbox for running OptSlope, an algorithm for metabolic engineering

Dependencies:

Specific instructions for Ubuntu 13.10:

  • Run the following commands in the terminal:

  • Make sure that the current directory is in PYTHONPATH. This can be achieved by adding this line to ~/.bashrc: export PYTHONPATH=.:$PYTHONPATH

  • Install CPLEX (we recommend applying to IBM Academic Initiative)