From 3b69ab8fd9339e354d595ebe0cccb50666352bc4 Mon Sep 17 00:00:00 2001
From: =?UTF-8?q?Petr=20Kr=C3=A1l?= <petr@inuits.eu>
Date: Mon, 4 Nov 2024 11:35:33 +0100
Subject: [PATCH] adding easyconfigs: Stacks-2.68-foss-2023a.eb

---
 .../s/Stacks/Stacks-2.68-foss-2023a.eb        | 29 +++++++++++++++++++
 1 file changed, 29 insertions(+)
 create mode 100644 easybuild/easyconfigs/s/Stacks/Stacks-2.68-foss-2023a.eb

diff --git a/easybuild/easyconfigs/s/Stacks/Stacks-2.68-foss-2023a.eb b/easybuild/easyconfigs/s/Stacks/Stacks-2.68-foss-2023a.eb
new file mode 100644
index 00000000000..f5c8c3b976d
--- /dev/null
+++ b/easybuild/easyconfigs/s/Stacks/Stacks-2.68-foss-2023a.eb
@@ -0,0 +1,29 @@
+easyblock = 'ConfigureMake'
+
+name = 'Stacks'
+version = '2.68'
+
+homepage = 'https://catchenlab.life.illinois.edu/stacks/'
+description = """Stacks is a software pipeline for building loci from short-read sequences, such as those generated on
+ the Illumina platform. Stacks was developed to work with restriction enzyme-based data, such as RAD-seq,
+ for the purpose of building genetic maps and conducting population genomics and phylogeography.
+"""
+
+toolchain = {'name': 'foss', 'version': '2023a'}
+
+source_urls = ['https://catchenlab.life.illinois.edu/stacks/source/']
+sources = [SOURCELOWER_TAR_GZ]
+checksums = ['9dc51ea356d60eb4557b0b2d1a8854aafae492aed87f974e0249cc09aa5e7650']
+
+dependencies = [
+    ('zlib', '1.2.13'),
+]
+
+sanity_check_paths = {
+    'files': ['bin/clone_filter', 'bin/cstacks', 'bin/gstacks', 'bin/kmer_filter', 'bin/phasedstacks',
+              'bin/populations', 'bin/process_radtags', 'bin/process_shortreads', 'bin/sstacks',
+              'bin/tsv2bam', 'bin/ustacks'],
+    'dirs': [],
+}
+
+moduleclass = 'bio'