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pyproject.toml
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pyproject.toml
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[tool.poetry]
name = "ms_sample_list_creator"
version = "0.5"
description = "A tool to automatically genereate MS sample lists for the DBGI project"
authors = ["Edouard Brülhart <[email protected]>"]
repository = "https://github.com/digital-botanical-gardens-initiative//ms-sample-list-creator"
documentation = "https://digital-botanical-gardens-initiative/.github.io/ms-sample-list-creator/"
readme = "README.md"
packages = [
{include = "ms_sample_list_creator"}
]
[tool.poetry.dependencies]
python = ">=3.8.18,<=3.8.20"
requests = "^2.31.0"
types-requests = "^2.31.0.20240406"
pyinstaller = "^6.5.0"
pytest = "^7.2.0"
pytest-cov = "^5.0.0"
pandas = "^2.0.3"
pandas-stubs = "^2.0.3"
[tool.poetry.group.dev.dependencies]
mypy = "^1.5.1"
pre-commit = "^3.4.0"
tox = "^4.11.1"
[build-system]
requires = ["poetry-core>=1.0.0"]
build-backend = "poetry.core.masonry.api"
[tool.mypy]
files = ["ms_sample_list_creator"]
disallow_untyped_defs = "True"
disallow_any_unimported = "True"
no_implicit_optional = "True"
check_untyped_defs = "True"
warn_return_any = "True"
warn_unused_ignores = "True"
show_error_codes = "True"
[tool.pytest.ini_options]
testpaths = ["tests"]
[tool.ruff]
target-version = "py37"
line-length = 120
fix = true
select = [
# flake8-2020
"YTT",
# flake8-bandit
"S",
# flake8-bugbear
"B",
# flake8-builtins
"A",
# flake8-comprehensions
"C4",
# flake8-debugger
"T10",
# flake8-simplify
"SIM",
# isort
"I",
# mccabe
"C90",
# pycodestyle
"E", "W",
# pyflakes
"F",
# pygrep-hooks
"PGH",
# pyupgrade
"UP",
# ruff
"RUF",
# tryceratops
"TRY",
]
ignore = [
# LineTooLong
"E501",
# DoNotAssignLambda
"E731",
]
[tool.ruff.format]
preview = true
[tool.ruff.per-file-ignores]
"tests/*" = ["S101"]