From 1492480fd2192d3e635e71d3ff2346db98a6f4a4 Mon Sep 17 00:00:00 2001 From: David Gasquez Date: Sat, 26 Oct 2024 11:31:26 +0200 Subject: [PATCH] chore: :art: change dasgter imports --- Dockerfile => .devcontainer/Dockerfile | 0 .devcontainer/devcontainer.json | 6 +- .github/dependabot.yml | 12 + .github/workflows/ci.yml | 12 +- Makefile | 11 +- datadex/__init__.py | 13 +- datadex/assets/dbt.py | 4 +- datadex/assets/huggingface.py | 6 +- datadex/assets/others.py | 12 +- datadex/assets/spain.py | 24 +- datadex/resources.py | 20 +- pyproject.toml | 54 +- uv.lock | 2839 ++++++++++++++++++++++++ 13 files changed, 2926 insertions(+), 87 deletions(-) rename Dockerfile => .devcontainer/Dockerfile (100%) create mode 100644 .github/dependabot.yml create mode 100644 uv.lock diff --git a/Dockerfile b/.devcontainer/Dockerfile similarity index 100% rename from Dockerfile rename to .devcontainer/Dockerfile diff --git a/.devcontainer/devcontainer.json b/.devcontainer/devcontainer.json index a310d71..33921f5 100644 --- a/.devcontainer/devcontainer.json +++ b/.devcontainer/devcontainer.json @@ -1,7 +1,7 @@ { "name": "Datadex", "build": { - "dockerfile": "../Dockerfile", + "dockerfile": "Dockerfile", "context": ".." }, "customizations": { @@ -24,8 +24,8 @@ }, "notebook.formatOnSave.enabled": true, "notebook.codeActionsOnSave": { - "source.fixAll.ruff": true, - "source.organizeImports.ruff": true + "source.fixAll.ruff": "explicit", + "source.organizeImports.ruff": "explicit" }, "python.analysis.typeCheckingMode": "basic", "python.analysis.autoImportCompletions": true, diff --git a/.github/dependabot.yml b/.github/dependabot.yml new file mode 100644 index 0000000..f33a02c --- /dev/null +++ b/.github/dependabot.yml @@ -0,0 +1,12 @@ +# To get started with Dependabot version updates, you'll need to specify which +# package ecosystems to update and where the package manifests are located. +# Please see the documentation for more information: +# https://docs.github.com/github/administering-a-repository/configuration-options-for-dependency-updates +# https://containers.dev/guide/dependabot + +version: 2 +updates: + - package-ecosystem: "devcontainers" + directory: "/" + schedule: + interval: weekly diff --git a/.github/workflows/ci.yml b/.github/workflows/ci.yml index 3441e72..c642990 100644 --- a/.github/workflows/ci.yml +++ b/.github/workflows/ci.yml @@ -23,14 +23,12 @@ jobs: steps: - name: Checkout uses: actions/checkout@v4 - - name: Set up Python - uses: actions/setup-python@v5 + - name: Install uv + uses: astral-sh/setup-uv@v2 with: - python-version: 3.12 - cache: pip - - name: Install dependencies - run: | - pip install -e . + enable-cache: true + - name: Install Python 3.12 + run: uv python install 3.12 - name: Run run: | make run diff --git a/Makefile b/Makefile index 4e78504..b968686 100644 --- a/Makefile +++ b/Makefile @@ -1,19 +1,18 @@ .DEFAULT_GOAL := run run: - dagster-dbt project prepare-and-package --file datadex/dbt_project.py - dagster asset materialize --select \* -m datadex + uv run dagster-dbt project prepare-and-package --file datadex/dbt_project.py + uv run dagster asset materialize --select \* -m datadex dev: - dagster dev + uv run dagster dev preview: quarto preview portal setup: - @command -v uv >/dev/null 2>&1 || pip install -U uv - uv venv - uv pip install -U -e ".[dev]" + command -v uv >/dev/null 2>&1 || pip install -U uv + uv sync . .venv/bin/activate dbt-docs: diff --git a/datadex/__init__.py b/datadex/__init__.py index e9c4c4a..2636527 100644 --- a/datadex/__init__.py +++ b/datadex/__init__.py @@ -1,6 +1,7 @@ import os -from dagster import EnvVar, Definitions, load_assets_from_modules +import dagster as dg + from dagster_dbt import DbtCliResource from dagster_duckdb_polars import DuckDBPolarsIOManager @@ -10,15 +11,15 @@ DATABASE_PATH = os.getenv("DATABASE_PATH", "data/database.duckdb") -all_assets = load_assets_from_modules([indicators, huggingface, others, spain, dbt]) +all_assets = dg.load_assets_from_modules([indicators, huggingface, others, spain, dbt]) resources = { "dbt": DbtCliResource(project_dir=dbt_project), "io_manager": DuckDBPolarsIOManager(database=DATABASE_PATH, schema="main"), - "iucn_redlist_api": IUCNRedListAPI(token=EnvVar("IUCN_REDLIST_TOKEN")), - "aemet_api": AEMETAPI(token=EnvVar("AEMET_API_TOKEN")), + "iucn_redlist_api": IUCNRedListAPI(token=dg.EnvVar("IUCN_REDLIST_TOKEN")), + "aemet_api": AEMETAPI(token=dg.EnvVar("AEMET_API_TOKEN")), "miteco_api": MITECOArcGisAPI(), - "dp": DatasetPublisher(hf_token=EnvVar("HUGGINGFACE_TOKEN")), + "dp": DatasetPublisher(hf_token=dg.EnvVar("HUGGINGFACE_TOKEN")), } -defs = Definitions(assets=[*all_assets], resources=resources) +defs = dg.Definitions(assets=[*all_assets], resources=resources) diff --git a/datadex/assets/dbt.py b/datadex/assets/dbt.py index 683f5ec..38ced6c 100644 --- a/datadex/assets/dbt.py +++ b/datadex/assets/dbt.py @@ -1,9 +1,9 @@ -from dagster import AssetExecutionContext +import dagster as dg from dagster_dbt import DbtCliResource, dbt_assets from ..dbt_project import dbt_project @dbt_assets(manifest=dbt_project.manifest_path) -def dbt_project_assets(context: AssetExecutionContext, dbt: DbtCliResource): +def dbt_project_assets(context: dg.AssetExecutionContext, dbt: DbtCliResource): yield from dbt.cli(["build"], context=context).stream() diff --git a/datadex/assets/huggingface.py b/datadex/assets/huggingface.py index d110a83..33ac9fe 100644 --- a/datadex/assets/huggingface.py +++ b/datadex/assets/huggingface.py @@ -1,11 +1,13 @@ import polars as pl -from dagster import AssetIn, asset +import dagster as dg from ..resources import DatasetPublisher def create_hf_asset(dataset_name: str): - @asset(name="huggingface_" + dataset_name, ins={"data": AssetIn(dataset_name)}) + @dg.asset( + name="huggingface_" + dataset_name, ins={"data": dg.AssetIn(dataset_name)} + ) def hf_asset(data: pl.DataFrame, dp: DatasetPublisher) -> None: """ Upload data to HuggingFace. diff --git a/datadex/assets/others.py b/datadex/assets/others.py index 8953a92..2d9bf61 100644 --- a/datadex/assets/others.py +++ b/datadex/assets/others.py @@ -2,16 +2,16 @@ import httpx import polars as pl -from dagster import AssetExecutionContext, Backoff, RetryPolicy, asset +import dagster as dg from ..resources import IUCNRedListAPI -@asset( - retry_policy=RetryPolicy(max_retries=5, delay=2, backoff=Backoff.EXPONENTIAL), +@dg.asset( + retry_policy=dg.RetryPolicy(max_retries=5, delay=2, backoff=dg.Backoff.EXPONENTIAL), ) def threatened_animal_species( - context: AssetExecutionContext, iucn_redlist_api: IUCNRedListAPI + context: dg.AssetExecutionContext, iucn_redlist_api: IUCNRedListAPI ) -> pl.DataFrame: """ Threatened animal species data from the IUCN Red List API. @@ -33,8 +33,8 @@ def threatened_animal_species( return pl.DataFrame(all_results, infer_schema_length=None) -@asset( - retry_policy=RetryPolicy(max_retries=5, delay=2, backoff=Backoff.EXPONENTIAL), +@dg.asset( + retry_policy=dg.RetryPolicy(max_retries=5, delay=2, backoff=dg.Backoff.EXPONENTIAL), ) def wikidata_asteroids() -> pl.DataFrame: """ diff --git a/datadex/assets/spain.py b/datadex/assets/spain.py index 87671ab..2f5dd7f 100644 --- a/datadex/assets/spain.py +++ b/datadex/assets/spain.py @@ -3,16 +3,18 @@ import httpx import polars as pl -from dagster import Backoff, RetryPolicy, AssetExecutionContext, asset +import dagster as dg from slugify import slugify from ..resources import AEMETAPI, MITECOArcGisAPI -@asset( - retry_policy=RetryPolicy(max_retries=3, delay=10, backoff=Backoff.EXPONENTIAL), +@dg.asset( + retry_policy=dg.RetryPolicy( + max_retries=3, delay=10, backoff=dg.Backoff.EXPONENTIAL + ), ) -async def spain_energy_demand(context: AssetExecutionContext) -> pl.DataFrame: +async def spain_energy_demand(context: dg.AssetExecutionContext) -> pl.DataFrame: """ Spain energy demand data. """ @@ -60,8 +62,8 @@ async def spain_energy_demand(context: AssetExecutionContext) -> pl.DataFrame: return df -@asset( - retry_policy=RetryPolicy(max_retries=5, delay=1, backoff=Backoff.EXPONENTIAL), +@dg.asset( + retry_policy=dg.RetryPolicy(max_retries=5, delay=1, backoff=dg.Backoff.EXPONENTIAL), ) def spain_ipc() -> pl.DataFrame: """ @@ -96,7 +98,7 @@ def spain_ipc() -> pl.DataFrame: return df -@asset() +@dg.asset() def spain_aemet_stations_data(aemet_api: AEMETAPI) -> pl.DataFrame: """ Spain AEMET stations data. @@ -125,9 +127,9 @@ def convert_to_decimal(coord): return df -@asset() +@dg.asset() def spain_aemet_weather_data( - context: AssetExecutionContext, aemet_api: AEMETAPI + context: dg.AssetExecutionContext, aemet_api: AEMETAPI ) -> pl.DataFrame: """ Spain weather data since 1940. @@ -167,9 +169,9 @@ def spain_aemet_weather_data( return df -@asset() +@dg.asset() def spain_water_reservoirs_data( - context: AssetExecutionContext, miteco_api: MITECOArcGisAPI + context: dg.AssetExecutionContext, miteco_api: MITECOArcGisAPI ) -> pl.DataFrame: """ Spain water reservoirs data since 1988. diff --git a/datadex/resources.py b/datadex/resources.py index 7c5ea69..990d786 100644 --- a/datadex/resources.py +++ b/datadex/resources.py @@ -7,15 +7,15 @@ import yaml import httpx import polars as pl -from dagster import InitResourceContext, ConfigurableResource, get_dagster_logger +import dagster as dg from pydantic import PrivateAttr from tenacity import retry, wait_exponential, stop_after_attempt from huggingface_hub import HfApi -log = get_dagster_logger() +log = dg.get_dagster_logger() -class IUCNRedListAPI(ConfigurableResource): +class IUCNRedListAPI(dg.ConfigurableResource): token: str def get_species(self, page): @@ -30,7 +30,7 @@ def get_species(self, page): return r.json()["result"] -class REDataAPI(ConfigurableResource): +class REDataAPI(dg.ConfigurableResource): endpoint: str = "https://apidatos.ree.es/en/datos" first_day: str = "2014-01-01" @@ -61,13 +61,13 @@ def get_market_prices(self, start_date: str, end_date: str, time_trunc="hour"): return self.query(category, widget, start_date, end_date, time_trunc) -class AEMETAPI(ConfigurableResource): +class AEMETAPI(dg.ConfigurableResource): endpoint: str = "https://opendata.aemet.es/opendata/api" token: str _client: httpx.Client = PrivateAttr() - def setup_for_execution(self, context: InitResourceContext) -> None: + def setup_for_execution(self, context: dg.InitResourceContext) -> None: transport = httpx.HTTPTransport(retries=5) limits = httpx.Limits(max_keepalive_connections=5, max_connections=10) self._client = httpx.Client( @@ -131,11 +131,11 @@ def get_all_stations(self): return self.query(url) - def teardown_after_execution(self, context: InitResourceContext) -> None: + def teardown_after_execution(self, context: dg.InitResourceContext) -> None: self._client.close() -class MITECOArcGisAPI(ConfigurableResource): +class MITECOArcGisAPI(dg.ConfigurableResource): endpoint: str = ( "https://services-eu1.arcgis.com/RvnYk1PBUJ9rrAuT/ArcGIS/rest/services/" ) @@ -168,12 +168,12 @@ def get_water_reservoirs_data(self, start_date=None, end_date=None): return query_response -class DatasetPublisher(ConfigurableResource): +class DatasetPublisher(dg.ConfigurableResource): hf_token: str _api: HfApi = PrivateAttr() - def setup_for_execution(self, context: InitResourceContext) -> None: + def setup_for_execution(self, context: dg.InitResourceContext) -> None: self._api = HfApi(token=self.hf_token) def publish( diff --git a/pyproject.toml b/pyproject.toml index 615b460..9f64e0e 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -3,22 +3,20 @@ name = "datadex" version = "1.0.0" authors = [{ name = "David Gasquez" }] dependencies = [ - "altair", - "dagster-dbt==0.24.2", - "dagster-duckdb-polars==0.24.2", - "dagster-duckdb", - "dagster==1.8.2", - "datasets", - "dbt-core", - "dbt-duckdb", - "duckdb==1.0.0", - "huggingface_hub", - "httpx[http2]", - "ipykernel", - "ipywidgets", - "pyarrow", - "python-slugify", - "tenacity", + "dagster-dbt>=0.24.13", + "dagster-duckdb>=0.24.13", + "dagster-duckdb-polars>=0.24.13", + "dagster>=1.8.13", + "datasets>=3.0.2", + "dbt-core>=1.8.8", + "dbt-duckdb>=1.9.0", + "duckdb>=1.1.2", + "httpx>=0.27.2", + "huggingface-hub>=0.26.1", + "ipykernel>=6.29.5", + "pyarrow>=17.0.0", + "python-slugify>=8.0.4", + "tenacity>=9.0.0", ] requires-python = ">=3.11, <=3.13" @@ -26,28 +24,16 @@ readme = "README.md" license = { text = "MIT" } [project.urls] -Homepage = "https://davidgasquez.github.io/datadex/" -Changelog = "https://github.com/davidgasquez/datadex/commits/main/" -Issues = "https://github.com/davidgasquez/datadex/issues" -CI = "https://github.com/davidgasquez/datadex/actions" +Homepage = "https://datadex.datonic.io/" +Changelog = "https://github.com/datonic/datadex/commits/main/" +Issues = "https://github.com/datonic/datadex/issues" +CI = "https://github.com/datonic/datadex/actions" -[project.optional-dependencies] -dev = 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