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cellbender on visium data #400

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aelhossiny opened this issue Dec 10, 2024 · 0 comments
Open

cellbender on visium data #400

aelhossiny opened this issue Dec 10, 2024 · 0 comments

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@aelhossiny
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Hi, thank you so much for such an incredible tool. Have cellbender been tested on visium data? I have tried to use it with the default parameters but it seems to be producing weird results on some samples while correcting for obvious background contamination on other samples
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@aelhossiny