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NEWS
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NEWS
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Changing tests based on an updated version of ggplot2 to 3.5.0 which changes
the length of the ggplot object.
CHANGES IN VERSION 1.9.0 (devel)
------------------------
o Default addition of chain where it is absent.
CHANGES IN VERSION 1.1.1 (devel)
-----------------------
FEATURES
o New function called draw_folding(). This function allows the drawing
of the STRAND, HELIX and TURN types which denote regions of the proteins
that assemble as beta-strands, alpha helicies or make a turn in the 3D
structure of the protein.
o New function called parse_gff(). This function imports files or urls
that link to a GFF3 format and parses the data to allow it to be plotted.
CHANGES IN VERSION 0.99.10
-----------------------
ARGUMENT
o show.legend added as argument to allow the option to show or not show
the legend as per ggplot2.
CHANGES IN VERSION 0.99.9
-----------------------
FEATURES
o New function called draw_recept_dom(). This function allows the drawing
of the TOPO_DOM and TRANSMEM types of receptors. Data from TNFR1 and CD40
are included to demonstate the function.
CHANGES IN VERSION 0.99.8
-----------------------
FEATURES
o New function called extact_transcripts. This function will ammend the
data frame to allow each chain from the same UniProt accession number to
to drawn separately. A vignette entitled drawProteins_extract_transcripts
has been written to demonstrate.
o LazyData is now false and NAMESPACE updated as per Bioconductor review.
CHANGES IN VERSION 0.98.3
-----------------------
FEATURES
o New function called draw_canvas. This function was previously within
draw_chains but has now been pulled out to allow the generation of a canvas
separately from the chains. It did require quite a rewrite but I think
it will make things more useful For example, it will allow the plotting of
domains without chains which has the potential to be very useful.
CHANGES IN VERSION 0.98.2
-----------------------
FEATURES
o Rename functions from geom to draw. E.g geom_chains is now geom_draw.
This is because they weren't really geoms and using the word draw seem
more helpful and a better reflection of the function.
CHANGES VERSION 0.98.1
-------------------------
FEATURES
o Drawing protein schematics from Uniprot database with Accession numbers