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environment.yml
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environment.yml
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name: simplecryoem
channels:
- conda-forge
- defaults
dependencies:
- _libgcc_mutex=0.1=conda_forge
- _openmp_mutex=4.5=2_kmp_llvm
- anyio=4.6.2=py311h06a4308_0
- argon2-cffi-bindings=21.2.0=py311h5eee18b_0
- astropy=6.1.4=py311h9f3472d_0
- async-lru=2.0.4=py311h06a4308_0
- attrs=24.2.0=py311h06a4308_0
- babel=2.11.0=py311h06a4308_0
- beautifulsoup4=4.12.3=py311h06a4308_0
- blas=1.0=mkl
- bottleneck=1.3.7=py311hf4808d0_0
- brotli=1.0.9=h5eee18b_8
- brotli-bin=1.0.9=h5eee18b_8
- brotli-python=1.0.9=py311h6a678d5_8
- bzip2=1.0.8=h5eee18b_6
- c-ares=1.34.2=heb4867d_0
- ca-certificates=2024.8.30=hbcca054_0
- cffi=1.17.1=py311h1fdaa30_0
- cfitsio=4.2.0=hd9d235c_0
- comm=0.2.1=py311h06a4308_0
- contourpy=1.2.0=py311hdb19cb5_0
- cyrus-sasl=2.1.28=h52b45da_1
- dbus=1.13.18=hb2f20db_0
- debugpy=1.6.7=py311h6a678d5_0
- expat=2.6.3=h6a678d5_0
- fontconfig=2.14.1=h55d465d_3
- fonttools=4.51.0=py311h5eee18b_0
- freetype=2.12.1=h4a9f257_0
- glib=2.78.4=h6a678d5_0
- glib-tools=2.78.4=h6a678d5_0
- gst-plugins-base=1.14.1=h6a678d5_1
- gstreamer=1.14.1=h5eee18b_1
- h11=0.14.0=py311h06a4308_0
- httpcore=1.0.2=py311h06a4308_0
- httpx=0.27.0=py311h06a4308_0
- icu=73.1=h6a678d5_0
- idna=3.7=py311h06a4308_0
- intel-openmp=2023.1.0=hdb19cb5_46306
- ipykernel=6.29.5=py311h06a4308_0
- ipython=8.27.0=py311h06a4308_0
- ipywidgets=8.1.2=py311h06a4308_0
- jedi=0.19.1=py311h06a4308_0
- jinja2=3.1.4=py311h06a4308_0
- jpeg=9e=h5eee18b_3
- jsonschema=4.23.0=py311h06a4308_0
- jsonschema-specifications=2023.7.1=py311h06a4308_0
- jupyter=1.0.0=py311h06a4308_9
- jupyter-lsp=2.2.0=py311h06a4308_0
- jupyter_client=8.6.0=py311h06a4308_0
- jupyter_console=6.6.3=py311h06a4308_0
- jupyter_core=5.7.2=py311h06a4308_0
- jupyter_events=0.10.0=py311h06a4308_0
- jupyter_server=2.14.1=py311h06a4308_0
- jupyter_server_terminals=0.4.4=py311h06a4308_1
- jupyterlab=4.2.5=py311h06a4308_0
- jupyterlab_pygments=0.1.2=py_0
- jupyterlab_server=2.27.3=py311h06a4308_0
- jupyterlab_widgets=3.0.10=py311h06a4308_0
- kiwisolver=1.4.4=py311h6a678d5_0
- krb5=1.20.1=h143b758_1
- lcms2=2.12=h3be6417_0
- ld_impl_linux-64=2.40=h12ee557_0
- lerc=3.0=h295c915_0
- libbrotlicommon=1.0.9=h5eee18b_8
- libbrotlidec=1.0.9=h5eee18b_8
- libbrotlienc=1.0.9=h5eee18b_8
- libclang=14.0.6=default_hc6dbbc7_1
- libclang13=14.0.6=default_he11475f_1
- libcups=2.4.2=h2d74bed_1
- libcurl=8.1.2=h409715c_0
- libdeflate=1.17=h5eee18b_1
- libedit=3.1.20230828=h5eee18b_0
- libev=4.33=hd590300_2
- libffi=3.4.4=h6a678d5_1
- libgcc=14.2.0=h77fa898_1
- libgcc-ng=14.2.0=h69a702a_1
- libgfortran-ng=11.2.0=h00389a5_1
- libgfortran5=11.2.0=h1234567_1
- libglib=2.78.4=hdc74915_0
- libiconv=1.16=h5eee18b_3
- libllvm14=14.0.6=hecde1de_4
- libnghttp2=1.58.0=h47da74e_1
- libpng=1.6.39=h5eee18b_0
- libpq=12.17=hdbd6064_0
- libsodium=1.0.18=h7b6447c_0
- libssh2=1.11.0=h0841786_0
- libstdcxx=14.2.0=hc0a3c3a_1
- libstdcxx-ng=14.2.0=h4852527_1
- libtiff=4.5.1=h6a678d5_0
- libuuid=1.41.5=h5eee18b_0
- libwebp-base=1.3.2=h5eee18b_1
- libxcb=1.15=h7f8727e_0
- libxkbcommon=1.0.1=h097e994_2
- libxml2=2.13.1=hfdd30dd_2
- libzlib=1.2.13=h4ab18f5_6
- llvm-openmp=19.1.3=h024ca30_0
- llvmlite=0.43.0=py311h6a678d5_0
- lz4-c=1.9.4=h6a678d5_1
- markupsafe=2.1.3=py311h5eee18b_0
- matplotlib=3.9.2=py311h06a4308_0
- matplotlib-base=3.9.2=py311h6fb44e5_0
- matplotlib-inline=0.1.6=py311h06a4308_0
- mistune=2.0.4=py311h06a4308_0
- mkl=2023.1.0=h213fc3f_46344
- mkl-service=2.4.0=py311h5eee18b_1
- mkl_fft=1.3.10=py311h5eee18b_0
- mkl_random=1.2.7=py311ha02d727_0
- multiprocess=0.70.17=py311h9ecbd09_0
- mysql=5.7.24=h721c034_2
- nbclient=0.8.0=py311h06a4308_0
- nbconvert=7.16.4=py311h06a4308_0
- nbformat=5.10.4=py311h06a4308_0
- ncurses=6.4=h6a678d5_0
- nest-asyncio=1.6.0=py311h06a4308_0
- notebook=7.2.2=py311h06a4308_1
- notebook-shim=0.2.3=py311h06a4308_0
- numba=0.60.0=py311h4bc866e_0
- numexpr=2.10.1=py311h3c60e43_0
- numpy=1.26.4=py311h08b1b3b_0
- numpy-base=1.26.4=py311hf175353_0
- openjpeg=2.5.2=he7f1fd0_0
- openssl=3.3.2=hb9d3cd8_0
- overrides=7.4.0=py311h06a4308_0
- packaging=24.1=py311h06a4308_0
- pandas=2.2.2=py311ha02d727_0
- pcre2=10.42=hebb0a14_1
- pillow=10.4.0=py311h5eee18b_0
- pip=24.2=py311h06a4308_0
- platformdirs=3.10.0=py311h06a4308_0
- ply=3.11=py311h06a4308_0
- prometheus_client=0.14.1=py311h06a4308_0
- prompt-toolkit=3.0.43=py311h06a4308_0
- prompt_toolkit=3.0.43=hd3eb1b0_0
- psutil=5.9.0=py311h5eee18b_0
- pure_eval=0.2.2=pyhd3eb1b0_0
- pyerfa=2.0.1.4=py311h9f3472d_2
- pyfftw=0.14.0=py311h07ce7c0_0
- pygments=2.15.1=py311h06a4308_1
- pyparsing=3.1.2=py311h06a4308_0
- pyqt=5.15.10=py311h6a678d5_0
- pyqt5-sip=12.13.0=py311h5eee18b_0
- pysocks=1.7.1=py311h06a4308_0
- python=3.11.10=he870216_0
- python-dateutil=2.9.0post0=py311h06a4308_2
- python-fastjsonschema=2.16.2=py311h06a4308_0
- python-json-logger=2.0.7=py311h06a4308_0
- python-tzdata=2023.3=pyhd3eb1b0_0
- python_abi=3.11=2_cp311
- pytz=2024.1=py311h06a4308_0
- pyyaml=6.0.2=py311h5eee18b_0
- pyzmq=25.1.2=py311h6a678d5_0
- qt-main=5.15.2=h53bd1ea_10
- qtconsole=5.6.0=py311h06a4308_0
- qtpy=2.4.1=py311h06a4308_0
- readline=8.2=h5eee18b_0
- referencing=0.30.2=py311h06a4308_0
- requests=2.32.3=py311h06a4308_0
- rfc3339-validator=0.1.4=py311h06a4308_0
- rfc3986-validator=0.1.1=py311h06a4308_0
- rpds-py=0.10.6=py311hb02cf49_0
- scipy=1.12.0=py311h08b1b3b_0
- seaborn=0.13.2=py311h06a4308_0
- send2trash=1.8.2=py311h06a4308_0
- setuptools=75.1.0=py311h06a4308_0
- sip=6.7.12=py311h6a678d5_0
- sniffio=1.3.0=py311h06a4308_0
- soupsieve=2.5=py311h06a4308_0
- sqlite=3.45.3=h5eee18b_0
- stack_data=0.2.0=pyhd3eb1b0_0
- tbb=2021.8.0=hdb19cb5_0
- terminado=0.17.1=py311h06a4308_0
- tinycss2=1.2.1=py311h06a4308_0
- tk=8.6.14=h39e8969_0
- tornado=6.4.1=py311h5eee18b_0
- traitlets=5.14.3=py311h06a4308_0
- typing-extensions=4.11.0=py311h06a4308_0
- typing_extensions=4.11.0=py311h06a4308_0
- unicodedata2=15.1.0=py311h5eee18b_0
- urllib3=2.2.3=py311h06a4308_0
- webencodings=0.5.1=py311h06a4308_1
- websocket-client=1.8.0=py311h06a4308_0
- wheel=0.44.0=py311h06a4308_0
- widgetsnbextension=4.0.10=py311h06a4308_0
- xz=5.4.6=h5eee18b_1
- yaml=0.2.5=h7b6447c_0
- zeromq=4.3.5=h6a678d5_0
- zlib=1.2.13=h4ab18f5_6
- zstd=1.5.6=hc292b87_0
- pip:
- argon2-cffi==21.3.0
- astropy-iers-data==0.2024.10.28.0.34.7
- asttokens==2.0.5
- bleach==4.1.0
- certifi==2024.8.30
- charset-normalizer==3.3.2
- colorama==0.4.6
- cycler==0.11.0
- decorator==5.1.1
- defusedxml==0.7.1
- dill==0.3.9
- exceptiongroup==1.2.2
- executing==0.8.3
- healpy==1.17.3
- importlib-metadata==8.5.0
- iniconfig==2.0.0
- jax==0.4.35
- jax-cuda12-pjrt==0.4.35
- jax-cuda12-plugin==0.4.35
- jaxlib==0.4.34
- jaxopt==0.8.3
- json5==0.9.6
- jupyterlab-pygments==0.1.2
- ml-dtypes==0.5.0
- mrcfile==1.5.3
- natsort==7.1.1
- nvidia-cublas-cu12==12.6.3.3
- nvidia-cuda-cupti-cu12==12.6.80
- nvidia-cuda-nvcc-cu12==12.6.77
- nvidia-cuda-runtime-cu12==12.6.77
- nvidia-cudnn-cu12==9.5.1.17
- nvidia-cufft-cu12==11.3.0.4
- nvidia-cusolver-cu12==11.7.1.2
- nvidia-cusparse-cu12==12.5.4.2
- nvidia-nccl-cu12==2.23.4
- nvidia-nvjitlink-cu12==12.6.77
- opt-einsum==3.4.0
- pandocfilters==1.5.0
- parso==0.8.3
- pathos==0.3.3
- pexpect==4.8.0
- pluggy==1.5.0
- pox==0.3.5
- ppft==1.7.6.9
- ptyprocess==0.7.0
- pure-eval==0.2.2
- pyarrow==18.0.0
- pycparser==2.21
- pyem==0.65
- pytest==8.3.3
- pytest-runner==6.0.0
- simplecryoem
- six==1.16.0
- stack-data==0.2.0
- starfile==0.5.2
- tomli==2.0.2
- tqdm==4.66.6
- tzdata==2023.3
- wcwidth==0.2.5
- zipp==3.20.2