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I have a question on matching in the "SpatialNF/examples/data" folder. How can I match the cells in mouse_cortex_molecular_cartography to the cell types in reference_scRNAseq? In the former there is a "parent_cell" identifier, but where do I find this identifier in the referecne scRANseq data?
Thanks a lot!
The text was updated successfully, but these errors were encountered:
Inside the 'examples/data' folders are only input files; not the resulting the cell type mappings. The 'parent_cell' just refers to the segmented cell in the spatial data where the transcript is located (not really important).
Thanks a lot for making all data available here.
I have a question on matching in the "SpatialNF/examples/data" folder. How can I match the cells in mouse_cortex_molecular_cartography to the cell types in reference_scRNAseq? In the former there is a "parent_cell" identifier, but where do I find this identifier in the referecne scRANseq data?
Thanks a lot!
The text was updated successfully, but these errors were encountered: