Error trying to pass flowFrame to gs_cyto_data

[OuNao]

Hi,

The gs_cyto_data documentation show that a cytoset/flowSet/ncdfFlowSet can be used:

Description
Accessor method that gets or replaces the cytoset/flowSet/ncdfFlowSet object in a GatingSet or GatingHierarchy

But the code

flowWorkspace/R/GatingSet_Methods.R

Line 502 in 79f1b86

data <- new("cytoset", pointer = get_cytoset(x@pointer))

use the pointer slot of the cytoset, so only cytoset is supported.

Maybe the documentation must be corrected and the code must test for cytoset.

Thanks.

[djhammill]

Thanks for reporting this issue @OuNao.

The replacement method for gs_cyto_data() doesn't support flowFrame or cytoframe objects. Currently only cytoset replacement values are supported.

We still want to retain support for replacement using flowSet objects so I have submitted PR #383 to fix this.