brainpipe_environment.yml

name: brainpipe
channels:
  - defaults
dependencies:
  - _libgcc_mutex=0.1=main
  - ca-certificates=2020.1.1=0
  - certifi=2020.4.5.1=py37_0
  - libedit=3.1.20181209=hc058e9b_0
  - libffi=3.2.1=hd88cf55_4
  - libgcc-ng=9.1.0=hdf63c60_0
  - libstdcxx-ng=9.1.0=hdf63c60_0
  - ncurses=6.2=he6710b0_0
  - openssl=1.1.1f=h7b6447c_0
  - pip=20.0.2=py37_1
  - python=3.7.3=h0371630_0
  - readline=7.0=h7b6447c_5
  - setuptools=46.1.3=py37_0
  - sqlite=3.31.1=h7b6447c_0
  - tk=8.6.8=hbc83047_0
  - wheel=0.34.2=py37_0
  - xz=5.2.5=h7b6447c_0
  - zlib=1.2.11=h7b6447c_3
  - pip:
    - cycler==0.10.0
    - cython==0.29.16
    - dcimg==0.6.0.post1
    - decorator==4.4.2
    - et-xmlfile==1.0.1
    - futures==3.1.1
    - h5py==2.10.0
    - imagecodecs==2020.2.18
    - imagecodecs-lite==2020.1.31
    - imageio==2.8.0
    - jdcal==1.4.1
    - joblib==0.14.1
    - kiwisolver==1.2.0
    - llvmlite==0.32.0
    - matplotlib==3.2.1
    - natsort==7.0.1
    - networkx==2.4
    - numba==0.49.0
    - numpy==1.18.3
    - opencv-python==4.2.0.34
    - openpyxl==3.0.3
    - pandas==1.0.3
    - pathlib2==2.3.5
    - pillow==7.1.1
    - protobuf==3.11.3
    - pyparsing==2.4.7
    - python-dateutil==2.8.1
    - pytz==2019.3
    - pywavelets==1.1.1
    - scikit-image==0.16.2
    - scikit-learn==0.22.2.post1
    - scipy==1.4.1
    - seaborn==0.10.0
    - simpleitk==1.2.4
    - six==1.14.0
    - tensorboardx==2.0
    - tifffile==2021.3.31
    - torch==1.4.0
    - torchvision==0.5.0
    - tqdm==4.45.0
    - xlrd==1.2.0
    - xvfbwrapper==0.2.9