Jupyter with local neurodesktop

[JonteP]

I am curious whether it is possible to interface with neurodesk via jupyter notebooks when running it locally in docker in the same way as through lab/play?
The closest I was able to get was running jupyter in VSCode within neurodesktop, but it doesn't seem to provide the same functionality.

[aswinnarayanan]

Hi @JonteP. We're currently finalising a new version of neurodesktop that's fully based on the jupyterlab environment just like lab/play . With the release of this version, the local, lab and play environments will all be using the same container.
https://github.com/NeuroDesk/neurodesktop/tree/jupyter-rebase
It should be just a week or two away from release, just doing the final tweaks and testing at the moment.

[stebo85]

Dear @JonteP,

thank you for finding this issue - we haven't completed the module load setup for notebooks, but this should only take a few days to finish up.

thank you
steffen

[stebo85]

I made progress on this. This is actually a bug in jupyterlmod and was recently introduced: cmd-ntrf/jupyter-lmod#63 - I will try to revert back to an older version of jupyterlmod until they fixed it.

[stebo85]

I reverted back to jupyterlmod 3.0.0; @aswinnarayanan - are the jupyter-rebase builds automatically build and released already?

[iishiishii]

Hi @JonteP
The custom data storage feature is now part of the newest version of NeurodeskApp. Thanks for being patient with us.
You can first uninstall the old version and grab the latest version for your operating system right here.
To use custom data directory, you can follow this instruction.
Please let us know if you find other issues.
Cheers.

[JonteP]

Thank you for implementing this!