environmentvariables from containers need to exposed through module load

[stebo85]

This problem affects for example FSL and SPM:

SPM doesn't run in a notebook, but when setting this it works:

os.environ['FORCE_SPMMCR']="1"
os.environ['SPMMCRCMD']="/cvmfs/neurodesk.ardc.edu.au/containers/spm12_r7771_20211206/spm12_r7771_20211206.simg/opt/spm12/run_spm12.sh /cvmfs/neurodesk.ardc.edu.au/containers/spm12_r7771_20211206/spm12_r7771_20211206.simg/opt/mcr/v97/ script"

-> this should be done using module load

Same for FSL:

os.environ["FSLDIR"]="/cvmfs/neurodesk.ardc.edu.au/containers/fsl_6.0.5.1_20221016/fsl_6.0.5.1_20221016.simg/opt/fsl-6.0.5.1/"

Should the module build script be creating these automatically?

1. Go in the container: Figure out what's on the path (go away from DEPLOY_PATH -> because it's often forgotten)
2. Figure out what environment variables are set inside the container -> Translate them to being set outside the container?