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Xnat-ingest

CI/CD codecov

De-identify and upload exported DICOM and associated data files to XNAT based on ID values stored within the DICOM headers.

Installation

Build the docker image from the root directory of a clone of this code repository

docker build -t xnat-ingest .

Running

The root CLI command is set to be the entrypoint of the Docker image so it can be run by

docker run xnat-ingest --help