diff --git a/mechanisms/chapman/micm/species.json b/mechanisms/chapman/micm/species.json index 0e9b84c..672a0da 100644 --- a/mechanisms/chapman/micm/species.json +++ b/mechanisms/chapman/micm/species.json @@ -5,40 +5,64 @@ "type": "CHEM_SPEC", "absolute tolerance": 1e-12, "molecular weight [kg mol-1]": 0.0280134, - "__is advected": true + "__is advected": false, + "__is parameterized": true }, { "name": "M", "type": "CHEM_SPEC", - "tracer type": "THIRD_BODY" + "tracer type": "THIRD_BODY", + "__is advected": false, + "__is parameterized": true }, { "name": "O", "type": "CHEM_SPEC", "absolute tolerance": 1e-12, "molecular weight [kg mol-1]": 0.0159994, - "__is advected": false + "__is advected": false, + "__is parameterized": false }, { "name": "O1D", "type": "CHEM_SPEC", "absolute tolerance": 1e-12, "molecular weight [kg mol-1]": 0.0159994, - "__is advected": false + "__is advected": false, + "__is parameterized": false }, { "name": "O2", "type": "CHEM_SPEC", "absolute tolerance": 1e-12, "molecular weight [kg mol-1]": 0.0319988, - "__is advected": true + "__is advected": false, + "__is parameterized": false, + "__is added to profile": true, + "__unit" : "molecule cm-3", + "__scale height [km]": 7.0 }, { "name": "O3", "type": "CHEM_SPEC", "absolute tolerance": 1e-12, "molecular weight [kg mol-1]": 0.0479982, - "__is advected": true + "__is advected": true, + "__is parameterized": false, + "__is added to profile": true, + "__unit" : "molecule cm-3", + "__scale height [km]": 7.0 + }, + { + "name": "dry_air", + "type": "CONSTANT", + "absolute tolerance": 1e-12, + "molecular weight [kg mol-1]": 0.0289644, + "__is advected": false, + "__is parameterized": false, + "__is added to profile": true, + "__unit" : "molecule cm-3", + "__scale height [km]": 8.01 } ] } \ No newline at end of file diff --git a/mechanisms/chapman/tuvx/config.json b/mechanisms/chapman/tuvx/config.json index 8c5300b..387e5bb 100644 --- a/mechanisms/chapman/tuvx/config.json +++ b/mechanisms/chapman/tuvx/config.json @@ -12,24 +12,6 @@ } ], "profiles": [ - { - "name": "O3", - "type": "O3", - "units": "molecule cm-3", - "file path": "musica_configurations/chapman/tuvx/data/profiles/atmosphere/ussa.ozone" - }, - { - "name": "air", - "type": "air", - "units": "molecule cm-3", - "file path": "musica_configurations/chapman/tuvx/data/profiles/atmosphere/ussa.dens" - }, - { - "name": "O2", - "type": "O2", - "units": "molecule cm-3", - "file path": "musica_configurations/chapman/tuvx/data/profiles/atmosphere/ussa.dens" - }, { "name": "solar zenith angle", "type": "solar zenith angle", diff --git a/mechanisms/terminator/micm/species.json b/mechanisms/terminator/micm/species.json index f663b07..df37897 100644 --- a/mechanisms/terminator/micm/species.json +++ b/mechanisms/terminator/micm/species.json @@ -5,14 +5,49 @@ "type": "CHEM_SPEC", "absolute tolerance": 1e-12, "molecular weight [kg mol-1]": 0.035453, - "__is advected": true + "__is advected": true, + "__is parameterized": false }, { "name": "Cl2", "type": "CHEM_SPEC", "absolute tolerance": 1e-12, "molecular weight [kg mol-1]": 0.070906, - "__is advected": true + "__is advected": true, + "__is parameterized": false + }, + { + "name": "O2", + "type": "CHEM_SPEC", + "tracer type": "CONSTANT", + "molecular weight [kg mol-1]": 0.0319988, + "__is advected": false, + "__is parameterized": true, + "__is added to profile": true, + "__unit" : "molecule cm-3", + "__scale height [km]": 7.0 + }, + { + "name": "O3", + "type": "CHEM_SPEC", + "tracer type": "CONSTANT", + "molecular weight [kg mol-1]": 0.0479982, + "__is advected": false, + "__is parameterized": true, + "__is added to profile": true, + "__unit" : "molecule cm-3", + "__scale height [km]": 7.0 + }, + { + "name": "dry_air", + "type": "CONSTANT", + "absolute tolerance": 1e-12, + "molecular weight [kg mol-1]": 0.0289644, + "__is advected": false, + "__is parameterized": false, + "__is added to profile": true, + "__unit" : "molecule cm-3", + "__scale height [km]": 8.01 } ] } \ No newline at end of file diff --git a/mechanisms/terminator/tuvx/config.json b/mechanisms/terminator/tuvx/config.json index 4538762..892cc90 100644 --- a/mechanisms/terminator/tuvx/config.json +++ b/mechanisms/terminator/tuvx/config.json @@ -12,24 +12,6 @@ } ], "profiles": [ - { - "name": "O3", - "type": "O3", - "units": "molecule cm-3", - "file path": "musica_configurations/chapman/tuvx/data/profiles/atmosphere/ussa.ozone" - }, - { - "name": "air", - "type": "air", - "units": "molecule cm-3", - "file path": "musica_configurations/chapman/tuvx/data/profiles/atmosphere/ussa.dens" - }, - { - "name": "O2", - "type": "O2", - "units": "molecule cm-3", - "file path": "musica_configurations/chapman/tuvx/data/profiles/atmosphere/ussa.dens" - }, { "name": "solar zenith angle", "type": "solar zenith angle",