From 0339f6e822ef197821542e4a671b812760348e0e Mon Sep 17 00:00:00 2001 From: unknown Date: Fri, 25 Oct 2024 18:33:53 -0400 Subject: [PATCH] adding info about image lists (#1028) --- docs/inputs.rst | 5 +++++ 1 file changed, 5 insertions(+) diff --git a/docs/inputs.rst b/docs/inputs.rst index 9ce3b1e3..2b2b9093 100644 --- a/docs/inputs.rst +++ b/docs/inputs.rst @@ -9,6 +9,11 @@ each channel so that 0 = 1st percentile of image values and 1 = 99th percentile. If you want to run multiple images in a directory, use the command line or a jupyter notebook to run cellpose. +If you have multiple images of the same size, it can be faster to input them into the +Cellpose `model.eval` function as an array rather than a list, and running with a large +batch size. This is because the model can process tiles from multiple images in single batches +on the GPU if the images are fed in as an array. + 3D segmentation ~~~~~~~~~~~~~~~~~~~~~~~~~~