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test.recuit.fasta
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test.recuit.fasta
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# hmmsearch :: search profile(s) against a sequence database
# HMMER 3.1b2 (February 2015); http://hmmer.org/
# Copyright (C) 2015 Howard Hughes Medical Institute.
# Freely distributed under the GNU General Public License (GPLv3).
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
# query HMM file: test2.hmm
# target sequence database: test.fasta
# output directed to file: test.recuit.fasta
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Query: VOG4192 [M=6225]
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
[No hits detected that satisfy reporting thresholds]
Domain annotation for each sequence (and alignments):
[No targets detected that satisfy reporting thresholds]
Internal pipeline statistics summary:
-------------------------------------
Query model(s): 1 (6225 nodes)
Target sequences: 503826 (202538052 residues searched)
Passed MSV filter: 107525 (0.213417); expected 10076.5 (0.02)
Passed bias filter: 80145 (0.159073); expected 10076.5 (0.02)
Passed Vit filter: 17206 (0.0341507); expected 503.8 (0.001)
Passed Fwd filter: 2508 (0.00497791); expected 5.0 (1e-05)
Initial search space (Z): 503826 [actual number of targets]
Domain search space (domZ): 0 [number of targets reported over threshold]
# CPU time: 697.83u 0.22s 00:11:38.05 Elapsed: 00:02:55.76
# Mc/sec: 7173.41
//
[ok]