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For better support, please use the template below to submit your issue. When your issue gets resolved please remember to close it.

Sometimes errors while running CNMF occur during parallel processing which prevents the log to provide a meaningful error message. Please reproduce your error with setting dview=None.

If you need to upgrade CaImAn follow the instructions given in the documentation.

  • Tell us a bit about your setup:

  1. Operating system (Linux/macOS/Windows):

  2. Python version (3.x):

  3. Working environment (Python IDE/Jupyter Notebook/other):

  4. Which of the demo scripts you're using for your analysis (if applicable):

  5. CaImAn version*:

  6. CaImAn installation process (pip install ./pip install -e ./conda):

*You can get the CaImAn version by creating a params object and then typing params.data['caiman_version']. If the field doesn't exist, type N/A and consider upgrading)

  • Describe the issue that you are experiencing

  • Copy error log below

  • If you're not reporting an error, type your message below