interrupt.ino

volatile int rate[10];                    // array to hold last ten IBI values
volatile unsigned long sampleCounter = 0; // used to determine pulse timing
volatile unsigned long lastBeatTime = 0;  // used to find IBI
volatile int P =512;                      // used to find peak in pulse wave, seeded
volatile int T = 512;                     // used to find trough in pulse wave, seeded
volatile int thresh = 512;                // used to find instant moment of heart beat, seeded
volatile int amp = 100;                   // used to hold amplitude of pulse waveform, seeded
volatile boolean firstBeat = true;        // used to seed rate array so we startup with reasonable BPM
volatile boolean secondBeat = false;      // used to seed rate array so we startup with reasonable BPM


hw_timer_t * timer = NULL;



void interruptSetup(){     
  // Use 1st timer of 4 (counted from zero).
  // Set 80 divider for prescaler (see ESP32 Technical Reference Manual for more
  // info).
  timer = timerBegin(0, 80, true);
  
  // Initializes Timer to run the ISR to sample every 2mS as per original Sketch.
  // Attach ISRTr function to our timer.
  timerAttachInterrupt(timer, &ISRTr, true);


  // Set alarm to call isr function every 2 milliseconds (value in microseconds).
  // Repeat the alarm (third parameter)
  timerAlarmWrite(timer, 2000, true);

  // Start an alarm
  timerAlarmEnable(timer);
   
} 


// THIS IS THE HW-TIMER INTERRUPT SERVICE ROUTINE. 
// Timer makes sure that we take a reading every 2 miliseconds
void ISRTr(){                                 // triggered when timer fires....
  Signal = analogRead(34);                    // read the Pulse Sensor on pin 34 3.3v sensor power......default ADC setup........
  Signal = map(Signal, 0, 4095, 0, 1023);     // Map the value back to original sketch range......
  sampleCounter += 2;                         // keep track of the time in mS with this variable
  int N = sampleCounter - lastBeatTime;       // monitor the time since the last beat to avoid noise

    //  find the peak and trough of the pulse wave
  if(Signal < thresh && N > (IBI/5)*3){       // avoid dichrotic noise by waiting 3/5 of last IBI
    if (Signal < T){                        // T is the trough
      T = Signal;                         // keep track of lowest point in pulse wave 
    }
  }

  if(Signal > thresh && Signal > P){          // thresh condition helps avoid noise
    P = Signal;                             // P is the peak
  }                                        // keep track of highest point in pulse wave

  //  NOW IT'S TIME TO LOOK FOR THE HEART BEAT
  // signal surges up in value every time there is a pulse
  if (N > 250){                                   // avoid high frequency noise
    if ( (Signal > thresh) && (Pulse == false) && (N > (IBI/5)*3) ){        
      Pulse = true;                               // set the Pulse flag when we think there is a pulse
      digitalWrite(LED_BUILTIN,HIGH);                // turn on pin 13 LED
      IBI = sampleCounter - lastBeatTime;         // measure time between beats in mS
      lastBeatTime = sampleCounter;               // keep track of time for next pulse

      if(secondBeat){                        // if this is the second beat, if secondBeat == TRUE
        secondBeat = false;                  // clear secondBeat flag
        for(int i=0; i<=9; i++){             // seed the running total to get a realisitic BPM at startup
          rate[i] = IBI;                      
        }
      }

      if(firstBeat){                         // if it's the first time we found a beat, if firstBeat == TRUE
        firstBeat = false;                   // clear firstBeat flag
        secondBeat = true;                   // set the second beat flag
        sei();                               // enable interrupts again
        return;                              // IBI value is unreliable so discard it
      }   


      // keep a running total of the last 10 IBI values
      word runningTotal = 0;                  // clear the runningTotal variable    

      for(int i=0; i<=8; i++){                // shift data in the rate array
        rate[i] = rate[i+1];                  // and drop the oldest IBI value 
        runningTotal += rate[i];              // add up the 9 oldest IBI values
      }

      rate[9] = IBI;                          // add the latest IBI to the rate array
      runningTotal += rate[9];                // add the latest IBI to runningTotal
      runningTotal /= 10;                     // average the last 10 IBI values 
      BPM = 60000/runningTotal;               // how many beats can fit into a minute? that's BPM!
      QS = true;                              // set Quantified Self flag 
      // QS FLAG IS NOT CLEARED INSIDE THIS ISR
    }                       
  }

  if (Signal < thresh && Pulse == true){   // when the values are going down, the beat is over
    digitalWrite(LED_BUILTIN,LOW);            // turn off pin 13 LED
    Pulse = false;                         // reset the Pulse flag so we can do it again
    amp = P - T;                           // get amplitude of the pulse wave
    thresh = amp/2 + T;                    // set thresh at 50% of the amplitude
    P = thresh;                            // reset these for next time
    T = thresh;
  }

  if (N > 2500){                           // if 2.5 seconds go by without a beat
    thresh = 512;                          // set thresh default
    P = 512;                               // set P default
    T = 512;                               // set T default
    lastBeatTime = sampleCounter;          // bring the lastBeatTime up to date        
    firstBeat = true;                      // set these to avoid noise
    secondBeat = false;                    // when we get the heartbeat back
  }


}// end isr