diff --git a/bibliography.bib b/bibliography.bib new file mode 100644 index 0000000..0bf5aed --- /dev/null +++ b/bibliography.bib @@ -0,0 +1,5589 @@ +@Online{AcademicProgrammesHPC, + author = {{High-Performance Computing in Europe}}, + title = {Academic Programmes}, + url = {https://hpc-portal.eu/academic-programmes}, + urldate = {2023-08-25}, +} + +@Article{Ahn2014, + author = {Ahn, June and Pellicone, Anthony and Butler, Brian S.}, + title = {Open badges for education: what are the implications at the intersection of open systems and badging?}, + journal = {Research in Learning Technology}, + year = {2014}, + volume = {22}, + month = aug, + issn = {2156-7077}, + doi = {10.3402/rlt.v22.23563}, + publisher = {Association for Learning Technology}, +} + +@Article{Ahsan2023, + author = {Ahsan, Kamrul and Akbar, Suraiyah and Kam, Booi and Abdulrahman, Muhammad Dan-Asabe}, + title = {Implementation of micro-credentials in higher education: A systematic literature review}, + journal = {Education and Information Technologies}, + year = {2023}, + month = mar, + doi = {10.1007/s10639-023-11739-z}, + publisher = {Springer Science and Business Media {LLC}}, +} + +@InProceedings{Akoh2017, + author = {Akoh, Ben}, + title = {Determinants of Mobile Learning in {I}ndigenous/Cultural Contexts: The Phenomenon in {C}anadian {F}irst {N}ations}, + booktitle = {Tomorrow's Learning: Involving Everyone}, + year = {2017}, + editor = {Tatnall, Arthur and Webb, Mary}, + booksubtitle = {Learning with and about Technologies and Computing}, + volume = {515}, + series = {{IFIP} Advances in Information and Communication Technology}, + publisher = {Springer International Publishing}, + isbn = {978-3-319-74310-3}, + pages = {24--34}, + doi = {10.1007/978-3-319-74310-3_4}, + address = {Cham, Switzerland}, + issn = {1868-422X}, + lccn = {2018930742}, + eventdate = {2017-07-03/2017-07-06}, + venue = {Dublin, Ireland}, +} + +@InProceedings{Alghamdi2017, + author = {Alghamdi, Jawaher and Holland, Charlotte}, + title = {Game-Play: Effects of Online Gamified and Game-Based Learning on Dispositions, Abilities and Behaviours of Primary Learners}, + booktitle = {Tomorrow's Learning: Involving Everyone}, + year = {2017}, + editor = {Tatnall, Arthur and Webb, Mary}, + booksubtitle = {Learning with and about Technologies and Computing}, + volume = {515}, + series = {{IFIP} Advances in Information and Communication Technology}, + publisher = {Springer International Publishing}, + isbn = {978-3-319-74310-3}, + pages = {55--63}, + doi = {10.1007/978-3-319-74310-3_7}, + address = {Cham, Switzerland}, + issn = {1868-422X}, + lccn = {2018930742}, + eventdate = {2017-07-03/2017-07-06}, + venue = {Dublin, Ireland}, +} + +@Online{AlgorithmicBattle, + author = {{RWTH Aachen University}}, + title = {Algorithmic Battle}, + url = {https://tcs.rwth-aachen.de/lehre/algobattle/WS2023/}, + urldate = {2023-07-03}, +} + +@TechReport{Alibay2022, + author = {Alibay, Irfan and Barnoud, Jonathan and Beckstein, Oliver and Gowers, Richard J. and Naughton, Fiona and Wang, Lily}, + title = {{MDAK}its: Supporting and promoting the development of community packages leveraging the {MDA}nalysis library [v0.1.0]}, + institution = {MDAnalysis}, + year = {2022}, + type = {White Paper}, + month = aug, + doi = {10.6084/m9.figshare.20520726.v1}, +} + +@TechReport{AllDigital2022, + author = {{ALL DIGITAL} and {HUAWEI} and {EY}}, + title = {Strategies to address the digital skills gap in the {EU}}, + institution = {Europeandigitalskills.eu}, + year = {2022}, + type = {White Paper}, + month = apr, + url = {https://www.europeandigitalskills.eu/white-paper/}, + publisher = {Huawei Technologies Co., Ltd}, +} + +@Article{Alt2021, + author = {Alt, Dorit}, + title = {Who benefits from digital badges? 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G. and {GOBLET Consortium}}, + title = {Correction: {GOBLET}: The Global Organisation for Bioinformatics Learning, Education and Training}, + journal = {{PLOS} Computational Biology}, + year = {2015}, + volume = {11}, + number = {5}, + month = may, + pages = {e1004281}, + doi = {10.1371/journal.pcbi.1004281}, + publisher = {Public Library of Science ({PLoS})}, +} + +@Article{Attwood2017, + author = {Attwood, Teresa K. and Blackford, Sarah and Brazas, Michelle D. and Davies, Angela and Schneider, Maria Victoria}, + title = {A global perspective on evolving bioinformatics and data science training needs}, + journal = {Briefings in Bioinformatics}, + year = {2019}, + volume = {20}, + number = {2}, + month = mar, + pages = {398--404}, + issn = {1477-4054}, + doi = {10.1093/bib/bbx100}, + publisher = {Oxford University Press ({OUP})}, +} + +@Article{Atwood2015a, + author = {Atwood, Teresa K. and Bongcam-Rudloff, Erik and Brazas, Michelle E. and Corpas, Manuel and Gaudet, Pascale and Lewitter, Fran and Mulder, Nicola and Palagi, Patricia M. and Schneider, Maria Victoria and van Gelder, Celia W. 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Aleksander Romaniuk and + Martino Sorbaro Sindaci and + amangoel185 and + Brynn Elliott and + Christian Kn{\"u}pfer and + jaguillette and + Jonathan Wheeler and + JorgeBCh and + Mark Tefero Kivumbi and + Adrian Pohl and + Andy Foster and + Annika Rockenberger and + Christopher Beltz and + Cora Assmann and + D{\'e}sir{\'e}e Treichler and + Erin Alison Becker and + Hao Ye and + James Deaton and + Jannetta Steyn and + Jeffrey Oliver and + Jeremy Guillette and + Joenio Marques da Costa and + Jon Wheeler and + Kelly Duffy and + Marcelina Nagales and + nikitabern and + Ragnhild Sundsbak and + raisaionin and + TM612}, + title = {{carpentries/instructor-training: The Carpentries + Instructor Training Februrary 2023}}, + month = feb, + year = 2023, + publisher = {Zenodo}, + version = {v2023.02.06}, + doi = {10.5281/zenodo.7612756}, +} + +@Article{Bryan2018, + author = {Bryan, Jennifer}, + title = {Excuse Me, Do You Have a Moment to Talk About Version Control?}, + journal = {The American Statistician}, + year = {2018}, + volume = {72}, + number = {1}, + pages = {20--27}, + month = jan, + doi = {10.1080/00031305.2017.1399928}, + publisher = {Informa {UK} Limited}, +} + +@Article{Cain2023, + author = {Cain, Jason Y. and Yu, Jessica S. and Bagheri, Neda}, + title = {The \emph{in silico} lab: Improving academic code using lessons from biology}, + journal = {Cell Systems}, + year = {2023}, + volume = {14}, + number = {1}, + pages = {1--6}, + month = jan, + doi = {10.1016/j.cels.2022.11.006}, + publisher = {Elsevier {BV}}, +} + +@Article{CanalesNegron2020, + author = {Canales-Negr{\'o}n, Ismael}, + title = {Principios de dise{\~{n}}o de insignias digitales en programas de educaci{\'{o}}n continua profesional: una revisi{\'{o}}n exploratoria}, + journal = {Revista Digital de Investigaci{\'{o}}n en Docencia Universitaria}, + year = {2020}, + volume = {14}, + number = {2}, + month = nov, + pages = {e1170}, + issn = {2223-2516}, + doi = {10.19083/ridu.2020.1170}, + publisher = {Universidad Peruana de Ciencias Aplicadas}, +} + +@Article{Carey2018, + author = {Carey, Maureen A. and Papin, Jason A.}, + title = {Ten simple rules for biologists learning to program}, + journal = {{PLOS} Computational Biology}, + year = {2018}, + volume = {14}, + number = {1}, + pages = {e1005871}, + month = jan, + doi = {10.1371/journal.pcbi.1005871}, + editor = {Markel, Scott}, + publisher = {Public Library of Science ({PLoS})}, +} + +@online{Carpentries, + author = {{The Carpentries}}, + title = {The Carpentries}, + url = {https://carpentries.org}, + urldate = {2023-06-16}, +} + +@Online{CarpentriesBecomingInstructor, + author = {{The Carpentries}}, + title = {Become a Carpentries Instructor}, + url = {https://docs.carpentries.org/topic_folders/for_instructors/new_instructors.html}, + urldate = {2023-07-12}, +} + +@online{CarpentriesCertificates, + author = {{The Carpentries}}, + title = {Certificates for {T}he {C}arpentries}, + url = {https://github.com/carpentries/learner-certificates}, + urldate = {2023-06-19}, +} + +@Online{CarpentriesData, + title = {{Data Carpentry}}, + url = {https://datacarpentry.org/}, + urldate = {2023-07-25}, +} + +@Online{CarpentriesHPC, + title = {{HPC Carpentry}}, + url = {https://www.hpc-carpentry.org/}, + urldate = {2023-07-25}, +} + +@online{CarpentriesIncubator, + author = {{The Carpentries}}, + title = {The Carpentries Incubator}, + url = {https://carpentries-incubator.org/}, + urldate = {2023-06-16}, +} + +@online{CarpentriesInstructorBadges, + author = {{The Carpentries}}, + title = {What does a badge mean?}, + subtitle = {Instructor Training}, + url = {https://carpentries.github.io/instructor-training/aio.html#what-does-a-badge-mean}, + urldate = {2023-06-19}, +} + +@Online{CarpentriesLearnerCertificates, + author = {{The Carpentries}}, + title = {Learner Certificates}, + url = {https://docs.carpentries.org/topic_folders/hosts_instructors/certificates.html}, + urldate = {2023-07-12}, +} + +@Online{CarpentriesLibrary, + title = {{Library Carpentry}}, + url = {https://librarycarpentry.org/index.html}, + urldate = {2023-07-25}, +} + +@Online{CarpentriesSoftware, + title = {{Software Carpentry}}, + url = {https://software-carpentry.org/}, + urldate = {2023-07-25}, +} + +@online{CarpentriesSpanish, + author = {{The Carpentries}}, + title = {Carpentries-es}, + url = {https://carpentries.org/latam-tf/}, + urldate = {2023-06-19}, +} + +@TechReport{Carretero2017, + author = {Carretero, Stephanie and Vuorikari, Riina and Punie, Yves}, + title = {{DigComp} 2.1: The European Digital Competence Framework for Citizens}, + institution = {Joint Research Centre (European Commission)}, + year = {2017}, + type = {Science for Policy report}, + subtitle = {With eight proficiency levels and examples of use}, + number = {JRC106281, EUR 28558 EN}, + doi = {10.2760/38842}, + address = {Luxembourg}, + isbn = {978-92-79-68006-9}, + issn = {1831-9424}, + publisher = {Publications Office of the European Union}, +} + +@Misc{Carver2020, + author = {Carver, Jeffrey C. and Cosden, Ian A.}, + title = {{IN}novative {T}raining {E}nabled by a {R}esearch {S}oftware {E}ngineering {C}ommunity of {T}rainers ({INTERSECT})}, + year = {2020}, + howpublished = {Zenodo}, + month = aug, + doi = {10.5281/zenodo.4281287}, +} + +@InProceedings{Carver2021, + author = {Carver, Jeffrey C. and Cosden, Ian A. and Hill, Chris and Gesing, Sandra and Katz, Daniel S.}, + title = {Sustaining Research Software via Research Software Engineers and Professional Associations}, + booktitle = {Proceedings of the 2021 {IEEE}/{ACM} International Workshop on Body of Knowledge for Software Sustainability ({BoKSS})}, + year = {2021}, + eventdate = {2021-05-22/2021-05-30}, + venue = {Virtual Event}, + publisher = {IEEE}, + month = jun, + isbn = {978-1-6654-4460-6}, + doi = {10.1109/bokss52540.2021.00016}, + address = {Los Alamitos, California, USA}, +} + +@online{CASTIEL2, + author = 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M.}, + title = {Learning to Fly: Development and Design of a Micro-Credentialing System for an Educator Preparation Program in the Absence of a Required Educational Technology Course}, + journal = {TechTrends}, + year = {2021}, + volume = {66}, + number = {2}, + month = oct, + pages = {276--286}, + doi = {10.1007/s11528-021-00673-x}, + publisher = {Springer Science and Business Media {LLC}}, +} + +@TechReport{ClementFontaine2019a, + author = {Cl{\'e}ment-Fontaine, M{\'e}lanie and Di Cosmo, Roberto and Guerry, Bastien and Moreau, Patrick and Pellegrini, Fran{\c c}ois}, + title = {Note d'opportunit{\'e} sur la valorisation des logiciels issus de la recherche}, + institution = {Comit{\'e} pour la science ouverte}, + year = {2019}, + type = {Research Report}, + month = nov, + doi = {10.52949/17}, +} + +@TechReport{ClementFontaine2019b, + author = {Cl{\'e}ment-Fontaine, M{\'e}lanie and Di Cosmo, Roberto and Guerry, Bastien and Moreau, Patrick and Pellegrini, Fran{\c c}ois}, + title = 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of Electrical and Electronics Engineers ({IEEE})}, +} + +@Article{Cosden2022b, + author = {Cosden, Ian A. and McHenry, Kenton and Katz, Daniel S.}, + title = {Research Software Engineers: Career Entry Points and Training Gaps}, + journal = {Computing in Science \& Engineering}, + year = {2022}, + volume = {24}, + number = {6}, + pages = {14--21}, + month = nov, + doi = {10.1109/mcse.2023.3258630}, + publisher = {Institute of Electrical and Electronics Engineers ({IEEE})}, +} + +@misc{CouncilOfEuropeProtocol1988, + title = {Protocol to the Convention for the Protection of Human Rights and Fundamental Freedoms (European Convention on Human Rights) as amended by Protocol No. 11}, + publisher = {Council of Europe}, + author = {{Council of Europe}}, + year = {1988}, + note = {Place: Strasbourg Publication Title: Council of Europe Treaty Series 155}, +} + +@online{coursera, +organization = {Coursera}, +title = {Coursera for Campus}, +url = {https://www.coursera.org/campus}, +urldate = 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Titus}, + title = {Walking the Talk: Adopting and Adapting Sustainable Scientific Software Development processes in a Small Biology Lab}, + journal = {Journal of Open Research Software}, + year = {2016}, + volume = {4}, + number = {1}, + month = nov, + pages = {e44}, + doi = {10.5334/jors.35}, + publisher = {Ubiquity Press, Ltd.}, +} + +@Article{Crymble2016, + author = {Crymble, Adam}, + title = {Identifying and Removing Gender Barriers in Open Learning Communities: \emph{{T}he {P}rogramming {H}istorian}}, + journal = {Blended Learning in Practice}, + year = {2016}, + issue = {Autumn}, + pages = {49--60}, + url = {https://uhra.herts.ac.uk/bitstream/handle/2299/17271/Blip_2016_Autumn_2016_Final_Autumn_2016.pdf#page=49}, + publisher = {University of Hertfordshire}, +} + +@Misc{Crymble2018, + author = {Crymble, Adam and Afanador-Llach, Maria Jos{\'e}}, + title = {Writing Workshop Report Bogot{\'a}, Colombia}, + year = {2018}, + howpublished = {The Programming Historian blog}, + month = 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Training and Skills Blog}, + month = jul, + url = {https://web.archive.org/web/20201121104150/https://www.ibm.com/blogs/ibm-training/ibm-issues-one-millionth-badge/}, + urldate = {2023-07-03}, +} + +@Article{Davies2020, + author = {Davies, Alan and Mueller, Julia and Moulton, Georgina}, + title = {Core competencies for clinical informaticians: A systematic review}, + journal = {International Journal of Medical Informatics}, + year = {2020}, + volume = {141}, + month = sep, + pages = {104237}, + doi = {10.1016/j.ijmedinf.2020.104237}, + publisher = {Elsevier {BV}}, +} + +@Article{Davies2022, + author = {Davies, Alan and Hassey, Alan and Williams, John and Moulton, Georgina}, + title = {Creation of a core competency framework for clinical informatics: From genesis to maintaining relevance}, + journal = {International Journal of Medical Informatics}, + year = {2022}, + volume = {168}, + month = dec, + pages = {104905}, + doi = {10.1016/j.ijmedinf.2022.104905}, + publisher = {Elsevier {BV}}, +} + +@InProceedings{Demchenko2021, + author = {Demchenko, Yuri and Stoy, Lennart}, + title = {Research Data Management and Data Stewardship Competences in University Curriculum}, + booktitle = {Proceedings of the 2001 {IEEE} Global Engineering Education Conference ({EDUCON})}, + year = {2021}, + editor = {Klinger, Thomas and Kollmitzer, Christian and Pester, Andreas}, + eventdate = {2021-04-21/2021-04-23}, + venue = {Vienna, Austria}, + publisher = {IEEE}, + month = apr, + isbn = {978-1-7281-8478-4}, + doi = {10.1109/educon46332.2021.9453956}, + address = {Red Hook, New York, USA}, + issn = {2165-9567}, +} + +@TechReport{DEPOCEI2013, + author = {{Development of Policy-Oriented Training Programmes in the Context of the European Integration (DEPOCEI)}}, + title = {Best Practices in Training}, + institution = {Polytechnic Institute of Leiria}, + year = {2013}, + type = {Report}, + month = may, + url = 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Code of Conduct}, + month = apr, + year = 2022, + publisher = {Deutsche Forschungsgemeinschaft}, + doi = {10.5281/zenodo.6472827}, +} + +@InCollection{Diamond2016, + author = {Diamond, James and Gonzalez, Pilar Carmina}, + title = {Digital Badges for Professional Development: Teachers' Perceptions of the Value of a New Credentialing Currency}, + booktitle = {Foundation of Digital Badges and Micro-Credentials}, + year = {2016}, + editor = {Ifenthaler, Dirk and Bellin-Mularski, Nicole and Mah, Dana-Kristin}, + booksubtitle = {Demonstrating and Recognizing Knowledge and Competencies}, + publisher = {Springer International Publishing}, + isbn = {978-3-319-15425-1}, + pages = {391--409}, + doi = {10.1007/978-3-319-15425-1_21}, + address = {Cham, Switzerland}, + month = jun, +} + +@Online{DigiFlex, + author = {{Institute for Innovation Research and Management}}, + title = {{D}igi{F}lex - Digital Flexibilization Program for an Individualized Freshman Year}, + url = {https://www.ifi-ge.de/en/projects/current-projects/translate-to-englisch-digiflex/}, + urldate = {2023-07-03}, +} + +@Online{DigitalLearning, + author = {{University of Suttgart}}, + title = {{d}igit@{L} -- digital learning and teaching at the {U}niversity of {S}uttgart: Boost. Skills. Support}, + url = {https://www.project.uni-stuttgart.de/digital/en/}, + urldate = {2023-07-03}, +} + +@TechReport{DigitalSkillsGap2023, + author = {{Directorate-General for Employment, Social Affairs and Inclusion (European Commission)}}, + title = {Plugging the digital skills gap}, + year = {2023}, + type = {EU Publications}, + number = {KE-03-23-208-EN-N}, + month = jun, + doi = {10.2767/016096}, + address = {Luxembourg}, + isbn = {978-92-68-04084-3}, + publisher = {Publications Office of the European Union}, +} + +@Article{Dingsoyr2017, + author = {Dings{\o}yr, Torgeir and Moe, Nils Brede and F{\ae}gri, Tor Erlend and Seim, Eva Amdahl}, + title = {Exploring software development at the very large-scale: a revelatory case study and research agenda for agile method adaptation}, + journal = {Empirical Software Engineering}, + year = {2017}, + volume = {23}, + number = {1}, + month = jun, + pages = {490--520}, + doi = {10.1007/s10664-017-9524-2}, + publisher = {Springer Science and Business Media {LLC}}, +} + +@Article{Dinsdale2015, + author = {Dinsdale, Elizabeth and Elgin, Sarah C. R. and Grandgenett, Neal and Morgan, William and Rosenwald, Anne and Tapprich, William and Triplett, Eric W. and Pauley, Mark A.}, + title = {{NIBLSE}: A Network for Integrating Bioinformatics into Life Sciences Education}, + journal = {{CBE}---Life Sciences Education}, + year = {2015}, + volume = {14}, + number = {4}, + month = dec, + pages = {le3}, + issn = {1931-7913}, + doi = {10.1187/cbe.15-06-0123}, + publisher = {American Society for Cell Biology ({ASCB})}, +} + +@InCollection{Donnelly2018, + author = {Donnelly, Roisin and Maguire, Terry}, + title = {{I}reland's Higher Education Teachers Have a National Professional Development Framework, Now What?}, + booktitle = {Transforming our World Through Design, Diversity and Education}, + year = {2018}, + editor = {Craddock, Gerald and Doran, Cormac and McNutt, Larry and Rice, D{\'o}nal}, + volume = {256}, + series = {Studies in Health Technology and Informatics}, + publisher = {IOS Press}, + isbn = {978-1-61499-923-2}, + pages = {655--666}, + doi = {10.3233/978-1-61499-923-2-655}, +} + +@TechReport{Duckles2016, + author = {Duckles, Beth M.}, + title = {Value of Software Carpentry to Instructors Report}, + year = {2016}, + month = jan, + url = {https://software-carpentry.org/files/bib/duckles-instructor-engagement-2016.pdf}, +} + +@online{ECTS, +organization = {European Education Area}, +title = {European Credit Transfer and Accumulation System ({ECTS})}, +url = {https://education.ec.europa.eu/education-levels/higher-education/inclusive-and-connected-higher-education/european-credit-transfer-and-accumulation-system}, +urldate = {2023-07-20}, +} + +@Online{EdinburghRSECollaborationCall2023, + organization = {{The Royal Society of Edinburgh}}, + title = {{RSE} Research Collaboration Grants}, + url = {https://rse.org.uk/funding-collaboration/award/rse-research-collaboration-grants/}, + urldate = {2023-08-11}, +} + +@Online{EdinburghRSEFellowshipCall2023, + organization = {{The Royal Society of Edinburgh}}, + title = {{RSE} Personal Research Fellowships}, + url = {https://rse.org.uk/funding-collaboration/award/rse-personal-research-fellowships/}, + urldate = {2023-08-11}, +} + +@online{EDUTRAIN, +organization = {German National Research Data Infrastructure (NFDI)}, +title={{NFDI}: Section Training \& Education}, +url={https://www.nfdi.de/section-edutrain/?lang=en}, +urldate={2023-07-27} +} + +@misc{EduTrain2022, +author = {Herres-Pawlis, Sonja and Pelz, Peter and Kockmann, Norbert and Gl\"{a}ser, Roger and Richter, Manuela and Liermann, Johannes and Ortmeyer, Jochen and Heine, Ina and Metzmacher, Amelie and Andres, Ann-Christin and M\"{u}nzmay, Andreas and Heuer, Jan-Ocko and Hagener, Malte and Dierkes, Jens and Wiljes, Cord and Lindst\"{a}dt, Birte and Danabalan, Renita and Jolliffe, John D.}, +title = {{S}ektionskonzept {T}raining \& {E}ducation zur {E}inrichtung einer {S}ektion im {V}erein {N}ationale {F}orschungsdateninfrastruktur ({NFDI}) {e.V.}}, +month = apr, +year = 2022, +publisher = {Zenodo}, +version = {2.0}, +doi = {10.5281/zenodo.6475541}, +} + +@online{edX, +organization = {{digital education company 2U}}, +title = {{edx} - 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Learning Platforms}, + journal = {{SSRN} Electronic Journal}, + year = {2015}, + month = nov, + doi = {10.2139/ssrn.2694736}, + publisher = {Elsevier {BV}}, +} + +@InProceedings{Haupt2017, + author = {Haupt, Carina and Schlauch, Tobias}, + title = {Track 1 Paper: The Software Engineering Community at {DLR} --- How we got where we are}, + booktitle = {Proceedings of the Workshop on Sustainable Software for Science: Practice and Experiences ({WSSSPE5.1})}, + year = {2017}, + editor = {Chue Hong, Neil and Druskat, Stephan and Haines, Robert and Jay, Caroline and Katz, Daniel S. and Sufi, Shoaib}, + eventdate = {2017-09-06/2017-09-06}, + venue = {University of Manchester, Manchester, United Kingdom}, + publisher = {figshare}, + month = sep, + doi = {10.6084/m9.figshare.5331703}, +} + +@InProceedings{Haupt2018, + author = {Haupt, Carina and Schlauch, Tobias and Meinel, Michael}, + title = {The software engineering initiative of {DLR}}, + booktitle = {Proceedings of the {SE4S}cience '18: 2018 {IEEE}/{ACM} 13\textsuperscript{th} International Workshop on Software Engineering for Science}, + year = {2018}, + editor = {Bilof, Randall}, + eventdate = {2018-06-02/2018-06-02}, + venue = {Gothenburg, Sweden}, + publisher = {ACM}, + month = jun, + isbn = {978-1-4503-5748-7}, + pages = {16--19}, + doi = {10.1145/3194747.3194749}, + address = {New York, New York, USA}, +} + +@TechReport{Hedinger2022, + author = {Hedinger, Franziska}, + title = {Microcertifications: d{\'e}veloppements r{\'e}cents en {S}uisse et {\`a} l'{\'e}chelle internationale}, + institution = {Swiss Federation for Adult Learning}, + year = {2022}, + type = {Rapport de fond}, + month = mar, + address = {Zurich, Switzerland}, +} + +@Article{Hennah2017, + author = {Hennah, Naomi and Seery, Michael K.}, + title = {Using Digital Badges for Developing High School Chemistry Laboratory Skills}, + journal = {Journal of Chemical Education}, + year = {2017}, + volume = {94}, + number = {7}, + month = may, + pages = {844--848}, + doi = {10.1021/acs.jchemed.7b00175}, + publisher = {American Chemical Society ({ACS})}, +} + +@Article{Heroux2022, + author = {Heroux, Michael A.}, + title = {Research Software Science: Expanding the Impact of Research Software Engineering}, + journal = {Computing in Science \& Engineering}, + year = {2022}, + volume = {24}, + number = {6}, + pages = {22--27}, + month = nov, + doi = {10.1109/mcse.2023.3260475}, + publisher = {Institute of Electrical and Electronics Engineers ({IEEE})}, +} + +@Misc{Hettrick2016, + author = {Hettrick, Simon}, + title = {A not-so-brief history of Research Software Engineers}, + year = {2016}, + month = aug, + howpublished = {Software Susitainability Institute}, + url = {https://www.software.ac.uk/blog/2016-08-17-not-so-brief-history-research-software-engineers-0}, + urldate = {2023-06-16}, +} + +@Article{Hickey2019, + author = {Hickey, Daniel T. and Chartrand, Grant T.}, + title = {Recognizing competencies vs. completion vs. participation: Ideal roles for web-enabled digital badges}, + journal = {Education and Information Technologies}, + year = {2019}, + volume = {25}, + number = {2}, + month = sep, + pages = {943--956}, + doi = {10.1007/s10639-019-10000-w}, + publisher = {Springer Science and Business Media {LLC}}, +} + +@online{HIDA, +author = {Helmholtz}, +title = {Helmholtz Information \& Data Science Academy ({HIDA})}, +url = {https://www.helmholtz-hida.de}, +urldate = {2023-06-16} +} + +@online{HIFIS, +author = {Helmholtz}, +title = {Helmholtz Federated {IT} Services ({HIFIS})}, +url = {https://hifis.net}, +urldate = {2023-06-16} +} + +@Article{Higashi2020, + author = {Higashi, Ross and Schunn, Christian D.}, + title = {Perceived relevance of digital badges predicts longitudinal change in program engagement}, + journal = {Journal of Educational Psychology}, + year = {2020}, + volume = {112}, + number = {5}, + month = jul, + pages = {1020--1041}, + doi = {10.1037/edu0000401}, + publisher = {American Psychological Association ({APA})}, +} + +@Article{Hiltemann2023, + author = {Hiltemann, Saskia and Rasche, Helena and Gladman, Simon and Hotz, Hans-Rudolf and Larivi{\`e}re, Delphine and Blankenberg, Daniel and Jagtap, Pratik D. and Wollmann, Thomas and Bretaudeau, Anthony and Gou{\'{e}}, Nadia and Griffin, Timothy J. and Royaux, Coline and Le Bras, Yvan and Mehta, Subina and Syme, Anna and Coppens, Frederik and Droesbeke, Bert and Soranzo, Nicola and Bacon, Wendi and Psomopoulos, Fotis and Gallardo-Alba, Crist{\'{o}}bal and Davis, John and F{\"o}ll, Melanie Christine and Fahrner, Matthias and Doyle, Maria A. and Serrano-Solano, Beatriz and Fouilloux, Anne Claire and van Heusden, Peter and Maier, Wolfgang and Clements, Dave and Heyl, Florian and {Galaxy Training Network} and Gr{\"u}ning, Bj{\"o}rn and Batut, B{\'e}r{\'e}nice}, + title = {Galaxy Training: A powerful framework for teaching!}, + journal = {{PLOS} Computational Biology}, + year = {2023}, + editor = {Ouellette, Francis}, + volume = 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{Biocuration - mapping resources and needs [version 2; peer review: 2 approved]}, + journal = {F1000Research}, + year = {2020}, + volume = {9}, + month = dec, + pages = {1094}, + doi = {10.12688/f1000research.25413.2}, + publisher = {F1000 Research Ltd}, +} + +@online{HPCAkademie, +organization = {HLRS}, +title = {Die {S}upercomputing {A}kademie}, +url={https://www.supercomputing-akademie.de/}, +urldate={2023-07-27} +} + +@online{HPCCF, + author = {{The HPC Certification Forum}}, + title = {HPC Certification Forum}, + url = {https://www.hpc-certification.org}, + urldate = {2023-11-01}, +} + +@online{HPCCFCompetencies, + author = {{The HPC Certification Forum}}, + title = {Competencies}, + url = {https://www.hpc-certification.org/cs/}, + urldate = {2023-06-16}, +} + +@Article{HunterZinck2021, + author = {Hunter-Zinck, Haley and de Siqueira, Alexandre Fioravante and V{\'{a}}squez, V{\'{a}}leri N. and Barnes, Richard and Martinez, Ciera C.}, + title = {Ten simple rules on writing clean and reliable open-source scientific software}, + journal = {{PLOS} Computational Biology}, + year = {2021}, + volume = {17}, + number = {11}, + pages = {e1009481}, + month = nov, + doi = {10.1371/journal.pcbi.1009481}, + editor = {Markel, Scott}, + publisher = {Public Library of Science ({PLoS})}, +} + +@Article{Hurst2015, + author = {Hurst, Emily Josephine}, + title = {Digital Badges: Beyond Learning Incentives}, + journal = {Journal of Electronic Resources in Medical Libraries}, + year = {2015}, + volume = {12}, + number = {3}, + month = jul, + pages = {182--189}, + doi = {10.1080/15424065.2015.1065661}, + publisher = {Informa {UK} Limited}, +} + +@Online{IBMBadges, + author = {{IBM}}, + title = {{IBM} Training / Badges}, + url = {https://www.ibm.com/training/search?query=*&trainingType=Badge}, + urldate = {2023-07-03}, +} + +@TechReport{ICDLEurope2021, + author = {ICDL}, + title = {{DigComp} and {ICDL}}, + institution = {ICDL Europe}, + year = {2021}, + subtitle = {Mapping {ICDL} to the {E}uropean {D}igital {C}ompetence {F}ramework}, + month = jan, + url = {https://icdleurope.org/policy-and-publications/digcomp-and-icdl/}, +} + +@Book{Ifenthaler2016, + title = {Foundation of Digital Badges and Micro-Credentials}, + year = {2016}, + editor = {Ifenthaler, Dirk and Bellin-Mularski, Nicole and Mah, Dana-Kristin}, + subtitle = {Demonstrating and Recognizing Knowledge and Competencies}, + publisher = {Springer International Publishing}, + isbn = {978-3-319-15425-1}, + doi = {10.1007/978-3-319-15425-1}, + address = {Cham, Switzerland}, + month = jun, +} + +@Article{InamoratodosSantos2023, + author = {Inamorato dos Santos, Andreia and Chinkes, Ernesto and Carvalho, Marco A. G. and Sol{\'{o}}rzano, Claudia M. V. and Marroni, Lilian S.}, + title = {The digital competence of academics in higher education: is the glass half empty or half full?}, + journal = {International Journal of Educational Technology in Higher Education}, + year = {2023}, + volume = {20}, + number = {1}, + month = feb, + issn = {2365-9440}, + doi = {10.1186/s41239-022-00376-0}, + owner = {jgrad}, + publisher = {Springer Science and Business Media {LLC}}, + timestamp = {2023.08.25}, +} + +@Online{INTERSECTOnlineResources, + author = {{INTERSECT}}, + title = {Existing Research Software Engineering Training Material}, + year = {2023}, + url = {https://intersect-training.org/training-links/}, + urldate = {2023-07-12}, +} + +@Book{Irving2021, + author = {Irving, Damien and Hertweck, Kate and Johnston, Luke and Ostblom, Joel and Wickham, Charlotte and Wilson, Greg}, + title = {Research Software Engineering with {P}ython}, + year = {2021}, + subtitle = {Building software that makes research possible}, + publisher = {CRC Press}, + isbn = {978-1-003-14348-2}, + doi = {10.1201/9781003143482}, +} + +@Article{Isik2023, + author = {I{\c s}{\i}k, Esra B{\"u}{\c s}ra and Brazas, Michelle D. and Schwartz, Russell and Gaeta, Bruno and Palagi, Patricia M. and Gelder, Celia W. G. van and Suravajhala, Prashanth and Singh, Harpreet and Morgan, Sarah L. and Zahroh, Hilyatuz and Ling, Maurice and Satagopam, Venkata P. and McGrath, Annette and Nakai, Kenta and Tan, Tin Wee and Gao, Ge and Mulder, Nicola and Sch{\"o}nbach, Christian and Zheng, Yun and De Las Rivas, Javier and Khan, Asif M.}, + title = {Grand challenges in bioinformatics education and training}, + journal = {Nature Biotechnology}, + year = {2023}, + volume = {41}, + number = {8}, + month = aug, + pages = {1171--1174}, + doi = {10.1038/s41587-023-01891-9}, + publisher = {Springer Science and Business Media {LLC}}, +} + +@Article{Jaana2019, + author = {Kullaslahti, Jaana and Ruhalahti, Sanna and Brauer, Sanna}, + title = {Professional Development of Digital Competences: Standardised Frameworks Supporting Evolving Digital Badging Practices}, + journal = {Journal of Siberian Federal University. Humanities \& Social Sciences}, + year = {2019}, + volume = {12}, + number = {2}, + month = feb, + pages = {175--186}, + doi = {10.17516/1997-1370-0387}, + publisher = {Siberian Federal University}, +} + +@TechReport{Jackson2011a, + author = {Jackson, Mike and Crouch, Steve and Baxter, Rob}, + title = {Software Evaluation: Criteria-Based Assessment}, + institution = {Software Sustainability Institute}, + year = {2011}, + type = {Software Evaluation Guide}, + month = nov, + url = {https://software.ac.uk/sites/default/files/SSI-SoftwareEvaluationCriteria.pdf}, +} + +@TechReport{Jackson2011b, + author = {Jackson, Mike and Crouch, Steve and Baxter, Rob}, + title = {Software Evaluation: Tutorial-Based Assessment}, + institution = {Software Sustainability Institute}, + year = {2011}, + type = {Software Evaluation Guide}, + month = nov, + url = {https://software.ac.uk/sites/default/files/SSI-SoftwareEvaluationTutorial.pdf}, +} + +@Article{Jalili2020a, + author = {Jalili, Vahid and Afgan, Enis and Gu, Qiang and Clements, Dave and Blankenberg, Daniel and Goecks, Jeremy and Taylor, James and Nekrutenko, Anton}, + title = {The {G}alaxy platform for accessible, reproducible and collaborative biomedical analyses: 2020 update}, + journal = {Nucleic Acids Research}, + year = {2020}, + volume = {48}, + number = {W1}, + month = jun, + pages = {W395--W402}, + doi = {10.1093/nar/gkaa434}, + publisher = {Oxford University Press ({OUP})}, + related = {Jalili2020b}, + relatedstring = {Corrected in}, +} + +@Article{Jalili2020b, + author = {Jalili, Vahid and Afgan, Enis and Gu, Qiang and Clements, Dave and Blankenberg, Daniel and Goecks, Jeremy and Taylor, James and Nekrutenko, Anton}, + title = {The {G}alaxy platform for accessible, reproducible and collaborative biomedical analyses: 2020 update}, + journal = {Nucleic Acids Research}, + year = {2020}, + volume = {48}, + number = {14}, + month = jun, + pages = {8205--8207}, + doi = {10.1093/nar/gkaa554}, + publisher = {Oxford University Press ({OUP})}, +} + +@TechReport{Jetten2021, + author = {Jetten, Mijke and Grootveld, Marjan and Mordant, Annemie and Jansen, Mascha and Bloemers, Margreet and Miedema, Margriet and van Gelder, Celia W.G.}, + title = {Professionalising data stewardship in the {N}etherlands: competences, training and education}, + institution = {National Programme Open Science}, + year = {2021}, + subtitle = {{D}utch roadmap towards national implementation of {FAIR} data stewardship}, + version = {version 1.1}, + month = feb, + doi = {10.5281/zenodo.4623713}, + publisher = {Zenodo}, +} + +@Article{Jimenez2017, + author = {Jim{\'{e}}nez, Rafael C. and Kuzak, Mateusz and Alhamdoosh, Monther and Barker, Michelle and Batut, B{\'{e}}r{\'{e}}nice and Borg, Mikael and Capella-Gutierrez, Salvador and Chue Hong, Neil and Cook, Martin and Corpas, Manuel and Flannery, Madison and Garcia, Leyla and Gelp{\'{i}}, Josep Ll. and Gladman, Simon and Goble, Carole and Gonz{\'{a}}lez Ferreiro, Montserrat and Gonzalez-Beltran, Alejandra and Griffin, Philippa C. and Gr{\"{u}}ning, Bj{\"{o}}rn and Hagberg, Jonas and Holub, Petr and Hooft, Rob and Ison, Jon and Katz, Daniel S. and Lesko{\v{s}}ek, Brane and G{\'{o}}mez, Federico L{\'{o}}pez and Oliveira, Luis J. and Mellor, David and Mosbergen, Rowland and Mulder, Nicola and Perez-Riverol, Yasset and Pergl, Robert and Pichler, Horst and Pope, Bernard and Sanz, Ferran and Schneider, Maria V. and Stodden, Victoria and Suchecki, Rados{\l}aw and Svobodov{\'{a}} Va{\v{r}}ekov{\'{a}}, Radka and Talvik, Harry-Anton and Todorov, Ilian and Treloar, Andrew and Tyagi, Sonika and van Gompel, Maarten and Vaughan, Daniel and Via, Allegra and Wang, Xiaochuan and Watson-Haigh, Nathan S. and Crouch, Steve}, + title = {Four simple recommendations to encourage best practices in research software [version 1; peer review: 3 approved]}, + journal = {F1000Research}, + year = {2017}, + volume = {6}, + pages = {876}, + month = jun, + doi = {10.12688/f1000research.11407.1}, + publisher = {F1000 Research Ltd}, +} + +@Article{Johanson2018, + author = {Johanson, Arne and Hasselbring, Wilhelm}, + title = {Software Engineering for Computational Science: Past, Present, Future}, + journal = {Computing in Science \& Engineering}, + year = {2018}, + volume = {20}, + number = {2}, + pages = {90--109}, + month = mar, + doi = {10.1109/mcse.2018.021651343}, + publisher = {Institute of Electrical and Electronics Engineers ({IEEE})}, +} + +@Article{Jones2017, + author = {Jones, W. Monty and Hope, Samantha and Adams, Brianne}, + title = {Teachers' perceptions of digital badges as recognition of professional development}, + journal = {British Journal of Educational Technology}, + year = {2017}, + volume = {49}, + number = {3}, + month = mar, + pages = {427--438}, + doi = {10.1111/bjet.12557}, + publisher = {Wiley}, +} + +@online{JOSE, + author = {{JOSE}}, + title = {The Journal of Open Source Education}, + url = {https://jose.theoj.org/}, + urldate = {2023-10-18}, +} + +@online{JOSS, + author = {{JOSS}}, + title = {The Journal of Open Source Software}, + url = {https://joss.theoj.org/}, + urldate = {2023-10-18}, +} + +@TechReport{Kampylis2015, + author = {Kampylis, Panagiotis and Punie, Yves and Devine, Jim}, + title = {Promoting Effective Digital-Age Learning}, + institution = {Joint Research Centre (European Commission)}, + year = {2015}, + type = {Science for Policy report}, + subtitle = {A {E}uropean Framework for Digitally-Competent Educational Organisations}, + number = {JRC98209, EUR 27599 EN}, + month = dec, + doi = {10.2791/54070}, + address = {Luxembourg}, + isbn = {978-92-79-54005-9}, + issn = {1831-9424}, + publisher = {Publications Office of the European Union}, +} + +@InProceedings{Kappes2015, + author = {Kappes, Sandra and Betro, Vincent C.}, + title = {Using {M}ozilla badges to certify {XSEDE} users and promote training}, + booktitle = {Proceedings of the 2015 {XSEDE} Conference on Scientific Advancements Enabled by Enhanced Cyberinfrastructure - {XSEDE} '15}, + year = {2015}, + publisher = {ACM Press}, + month = jul, + isbn = {978-1-4503-3720-5}, + doi = {10.1145/2792745.2792759}, + address = {New York, New York, USA}, + eventdate = {2015-07-26/2015-07-30}, + venue = {St. Louis, Missouri, USA}, +} + +@Misc{Katerbow2018, + author = {Katerbow, Matthias and Feulner, Georg}, + title = {Recommendations on the Development, Use and Provision of Research Software}, + year = {2018}, + howpublished = {Zenodo}, + doi = {10.5281/zenodo.1172988}, + keywords = {Research Software}, +} + +@Report{KDL, + author = {Smithies, James}, + title = {Research Software ({RS}) Careers}, + subtitle = {Generic Learnings from {King's Digital Lab}, {King's College London}}, + doi = {10.5281/zenodo.2559235}, + year = {2018}, + month = nov, + institution= {King's Digital Lab}, + type = {Report}, + version = {6.0}, + urldate = {2023-10-30}, + langid = {english}, +} + +@Article{Kim2021, + author = {Kim, Jihoon and Castelli, Darla M.}, + title = {Effects of Gamification on Behavioral Change in Education: A Meta-Analysis}, + journal = {International Journal of Environmental Research and Public Health}, + year = {2021}, + volume = {18}, + number = {7}, + month = mar, + pages = {3550}, + issn = {1660-4601}, + doi = {10.3390/ijerph18073550}, + publisher = {MDPI AG}, +} + +@TechReport{Kluzer2018, + author = {Kluzer, Stefano and Pujol Priego, Laia}, + title = {{DigComp} into action, get inspired make it happen}, + institution = {Joint Research Centre (European Commission)}, + year = {2018}, + type = {Science for Policy report}, + subtitle = {A user guide to the European Digital Competence framework}, + number = {JRC110624, EUR 29115 EN}, + month = may, + doi = {10.2760/112945}, + address = {Luxembourg}, + editor = {Carretero, Stephanie and Punie, Yves and Vuorikari, Riina and Cabrera, Marcelino and O'Keeffe, William}, + isbn = {978-92-79-79901-3}, + issn = {1831-9424}, + publisher = {Publications Office of the European Union}, +} + +@TechReport{Kluzer2019a, + author = {Kluzer, Stefano and Padroni, Rodolfo and Rizopoulos, Charalambos and Borotis, Spiros}, + title = {{DCDM} -- Digital Competence Development Methodology {v.2}}, + institution = {Digital Competences Development System}, + year = {2019}, + type = {Handbook}, + number = {Version 01}, + month = dec, + url = {http://www.dcds-project.eu/results/dcd-methodology/}, + publisher = {DCDS Project}, +} + +@TechReport{Kluzer2019b, + author = {Kluzer, Stefano and Padroni, Rodolfo}, + title = {{DCDS} Trainer Handbook ({TH})}, + institution = {Digital Competences Development System}, + year = {2019}, + type = {Handbook}, + number = {Version 03}, + month = nov, + url = {http://www.dcds-project.eu/resources/trainer-handbook/}, + publisher = {DCDS Project}, +} + +@TechReport{Kluzer2019c, + author = {Kluzer, Stefano and Padroni, Rodolfo}, + title = {{DCDS} Training Organisation Handbook ({TOH})}, + institution = {Digital Competences Development System}, + year = {2019}, + type = {Handbook}, + number = {Version 02}, + month = dec, + url = {http://www.dcds-project.eu/resources/training-organisation-handbook/}, + publisher = {DCDS Project}, +} + +@TechReport{Kluzer2020, + author = {Kluzer, Stefano and Centeno, Clara and O'Keeffe, William}, + title = {{DigComp} at Work}, + institution = {Joint Research Centre (European Commission)}, + year = {2020}, + type = {Science for Policy report}, + subtitle = {The {EU}'s digital competence framework in action on the labour market: a selection of case studies}, + number = {JRC120376, EUR 30166 EN}, + month = nov, + doi = {10.2760/17763}, + address = {Luxembourg}, + isbn = {978-92-76-22558-4}, + issn = {1831-9424}, + publisher = {Publications Office of the European Union}, +} + +@Article{KoehlerLeman2020, + author = {Koehler Leman, Julia and Weitzner, Brian D. and Renfrew, P. Douglas and Lewis, Steven M. and Moretti, Rocco and Watkins, Andrew M. and Mulligan, Vikram Khipple and Lyskov, Sergey and Adolf-Bryfogle, Jared and Labonte, Jason W. and Krys, Justyna and {RosettaCommons Consortium} and Bystroff, Christopher and Schief, William and Gront, Dominik and Schueler-Furman, Ora and Baker, David and Bradley, Philip and Dunbrack, Roland and Kortemme, Tanja and Leaver-Fay, Andrew and Strauss, Charlie E. M. and Meiler, Jens and Kuhlman, Brian and Gray, Jeffrey J. and Bonneau, Richard}, + title = {Better together: Elements of successful scientific software development in a distributed collaborative community}, + journal = {{PLOS} Computational Biology}, + year = {2020}, + volume = {16}, + number = {5}, + pages = {e1007507}, + month = may, + doi = {10.1371/journal.pcbi.1007507}, + editor = {Schneidman-Duhovny, Dina}, + publisher = {Public Library of Science ({PLoS})}, +} + +@TechReport{Konkol2021, + author = {Konkol, Markus and Jager-Ringoir, Katinka and Zurita-Milla, Ra{\'u}l}, + title = {Open Educational Resources}, + institution = {Faculty of Geo-Information Science and Earth Observation, University of Twente}, + year = {2021}, + subtitle = {Basic concepts, challenges, and business models}, + number = {Version 2.0}, + month = may, + doi = {10.5281/zenodo.4789124}, + publisher = {Zenodo}, +} + +@InProceedings{Koopman2022, + title = {{S}us{T}rainable: Promoting Sustainability as a Fundamental Driver in Software Development Training and Education}, + year = {2022}, + editor = {Koopman, Pieter and Lubbers, Mart and Fernandes, Jo{\~{a}}o Paulo}, + booktitle = {Teacher Training}, + titleaddon = {Revised lecture notes}, + publisher = {arXiv}, + month = apr, + doi = {10.48550/arXiv.2204.13993}, + eventdate = {2021-11-01/2021-11-05}, + venue = {Radboud University Nijmegen, Nijmegen, The Netherlands}, +} + +@TechReport{Krasavina2019, + author = {Krasavina, Andra and J{\=a}kobsone, M{\=a}ra and V{\=i}tola-Lapi{\c n}a, Vita}, + title = {{DCDS} Piloting and Evaluation Report}, + institution = {Digital Competences Development System}, + year = {2019}, + type = {{DCDS} Report}, + number = {Document 13 Version 2.0}, + month = oct, + url = {http://www.dcds-project.eu/resources/piloting-report/}, + publisher = {DCDS Project}, +} + +@Article{Kulikowski2012, + author = {Kulikowski, Casimir A. and Shortliffe, Edward H. and Currie, Leanne M. and Elkin, Peter L. and Hunter, Lawrence E. and Johnson, Todd R. and Kalet, Ira J. and Lenert, Leslie A. and Musen, Mark A. and Ozbolt, Judy G. and Smith, Jack W. and Tarczy-Hornoch, Peter Z. and Williamson, Jeffrey J.}, + title = {{AMIA} {B}oard white paper: definition of biomedical informatics and specification of core competencies for graduate education in the discipline}, + journal = {Journal of the American Medical Informatics Association}, + year = {2012}, + volume = {19}, + number = {6}, + month = nov, + pages = {931--938}, + doi = {10.1136/amiajnl-2012-001053}, + publisher = {Oxford University Press ({OUP})}, +} + +@Article{Kunkel2020a, + author = {Kunkel, Julian and Filinger, Weronika and Meesters, Christian and Gerbes, Anja}, + title = {The {HPC} {C}ertification {F}orum: Toward a Globally Acknowledged {HPC} Certification}, + journal = {Computing in Science \& Engineering}, + year = {2020}, + volume = {22}, + number = {4}, + pages = {110--114}, + issn = {1521-9615}, + doi = {10.1109/MCSE.2020.2996073}, +} + +@Article{Kunkel2020b, + author = {Kunkel, Julian Martin and Himstedt, Kai and Filinger, Weronika and Acquaviva, Jean-Thomas and Gerbes, Anja and Lafayette, Lev}, + title = {One Year {HPC} {C}ertification {F}orum in Retrospective}, + journal = {The Journal of Computational Science Education}, + year = {2020}, + volume = {11}, + number = {1}, + month = jan, + pages = {29--35}, + issn = {2153-4136}, + doi = {10.22369/issn.2153-4136/11/1/6}, +} + +@Article{Kunkel2020c, + author = {Kunkel, Julian and Himstedt, Kai and Filinger, Weronika and Acquaviva, Jean-Thomas and Gerbes, Anja and Lafayette, Lev}, + title = {Contributing {HPC} Skills to the {HPC} {C}ertification {F}orum}, + journal = {The Journal of Computational Science Education}, + year = {2020}, + volume = {11}, + number = {1}, + month = jan, + pages = {106--107}, + issn = {2153-4136}, + doi = {10.22369/issn.2153-4136/11/1/17}, +} + +@Article{Kunkel2020d, + author = {Kunkel, Julian and Himstedt, Kai and H\"{u}bbe, Nathanael and St\"{u}ben, Hinnerk and Schr\"{o}er, Sandra and Kuhn, Michael and Riebisch, Matthias and Olbrich, Stephan and Ludwig, Thomas and Filinger, Weronika and Acquaviva, Jean-Thomas and Gerbes, Anja and Lafayette, Lev}, + title = {Towards an {HPC} Certification Program}, + journal = {The Journal of Computational Science Education}, + year = {2019}, + volume = {10}, + number = {1}, + month = jan, + pages = {88--89}, + issn = {2153-4136}, + doi = {10.22369/issn.2153-4136/10/1/14}, +} + +@InProceedings{Laginja2022, + author = {Laginja, Iva and Robles, Pablo and Barjot, Kevin and Leboulleux, Lucie and Jensen-Clem, Rebecca and Brooks, Keira J. and Moriarty, Christopher}, + title = {Connecting the astronomical testbed community - the {CAOTIC} project: optimized teaching methods for software version control concepts}, + booktitle = {Adaptive Optics Systems {VIII}}, + year = {2022}, + editor = {Schreiber, Laura and Schmidt, Dirk and Vernet, Elise}, + volume = {12185}, + pages = {121853A}, + address = {Bellingham, Washington, USA}, + month = aug, + organization = {International Society for Optics and Photonics}, + publisher = {SPIE}, + doi = {10.1117/12.2629483}, + isbn = {9781510653528}, + issn = {1996-756X}, + eventdate = {2022-07-17/2022-07-23}, + eventitle = {{SPIE} Astronomical Telescopes + Instrumentation}, + venue = {Montr{\'e}al, Qu{\'e}bec, Canada}, +} + +@Article{Lamprecht2022a, + author = {Lamprecht, Anna-Lena and Martinez-Ortiz, Carlos and Barker, Michelle and Bartholomew, Sadie L. and Barton, Justin and Chue Hong, Neil and Cohen, Jeremy and Druskat, Stephan and Forest, Jeremy and Grad, Jean-No{\"e}l and Katz, Daniel S. and Richardson, Robin and Rosca, Robert and Schulte, Douwe and Struck, Alexander and Weinzierl, Marion}, + title = {What Do We (Not) Know About Research Software Engineering?}, + journal = {Journal of Open Research Software}, + year = {2022}, + volume = {10}, + number = {1}, + month = dec, + issn = {2049-9647}, + doi = {10.5334/jors.384}, + pages = {11}, + publisher = {Ubiquity Press, Ltd.}, +} + +@Article{Landwehr2017, + author = {Landwehr, Carl and Ludewig, Jochen and Meersman, Robert and Parnas, David Lorge and Shoval, Peretz and Wand, Yair and Weiss, David and Weyuker, Elaine}, + title = {{S}oftware {S}ystems {E}ngineering programmes a capability approach}, + journal = {Journal of Systems and Software}, + year = {2017}, + volume = {125}, + pages = {354--364}, + issn = {0164-1212}, + doi = {10.1016/j.jss.2016.12.016}, +} + +@Article{Larcombe2017, + author = {Larcombe, L. and Hendricusdottir, R. and Attwood, T. K. and Bacall, F. and Beard, N. and Bellis, L. J. and Dunn, W. B. and Hancock, J. M. and Nenadic, A. and Orengo, C. and Overduin, B. and Sansone, S.-A. and Thurston, M. and Viant, M. R. and Winder, C. L. and Goble, C. A. and Ponting, C. P. and Rustici, G.}, + title = {{ELIXIR}-{UK} role in bioinformatics training at the national level and across {ELIXIR} [version 1; peer review: 4 approved, 1 approved with reservations]}, + journal = {F1000Research}, + year = {2017}, + volume = {6}, + month = jun, + pages = {952}, + doi = {10.12688/f1000research.11837.1}, + publisher = {F1000 Research Ltd}, +} + +@TechReport{Law2018, + author = {Law, Nancy and Woo, David and de la Torre, Jimmy and Wong, Gary}, + title = {A Global Framework of Reference on Digital Literacy Skills for Indicator 4.4.2}, + institution = {UNESCO Institute for Statistics}, + year = {2018}, + type = {Information Paper}, + number = {No. 51, Ref. UIS/2018/ICT/IP/51}, + month = jun, + url = {https://uis.unesco.org/sites/default/files/documents/ip51-global-framework-reference-digital-literacy-skills-2018-en.pdf}, + address = {Montreal, Quebec, Canada}, +} + +@Misc{Leaser2019, + author = {Leaser, David}, + title = {{IBM} Digital Badge Program Overview}, + year = {2019}, + howpublished = {slideshare}, + month = jul, + url = {https://www.slideshare.net/DavidLeaser/ibm-digital-badge-program-overview}, +} + +@Article{Leaser2020, + author = {Leaser, David and Jona, Kemi and Gallagher, Sean}, + title = {Connecting Workplace Learning and Academic Credentials via Digital Badges}, + journal = {New Directions for Community Colleges}, + year = {2020}, + volume = {2020}, + number = {189}, + month = feb, + pages = {39--51}, + issn = {1536-0733}, + doi = {10.1002/cc.20396}, + publisher = {Wiley}, +} + +@TechReport{LeBerre2023, + author = {Le Berre, Daniel and Jeannas, Jean-Yves and Di Cosmo, Roberto and Pellegrini, Fran{\c c}ois}, + title = {Forges de l'Enseignement sup{\'e}rieur et de la Recherche}, + institution = {Comit{\'e} pour la science ouverte}, + year = {2023}, + month = jun, + doi = {10.52949/34}, + subtitle = {D{\'e}finition, usages, limitations rencontr{\'e}es et analyse des besoins}, +} + +@misc{Lee2015, + author = {Lee, Victor (Kwangchun)}, + title = {{K}orean Translation of {S}oftware {C}arpentry - version 5.2}, + howpublished = {Software Carpentry Blog}, + year = {2015}, + month = apr, + url = {https://software-carpentry.org/blog/2015/04/korean-translation-of-software-carpentry-ver-5-2.html}, + urldate = {2023-06-19}, +} + +@Article{Lee2018, + author = {Lee, Benjamin D.}, + title = {Ten simple rules for documenting scientific software}, + journal = {{PLOS} Computational Biology}, + year = {2018}, + volume = {14}, + number = {12}, + pages = {e1006561}, + month = dec, + doi = {10.1371/journal.pcbi.1006561}, + editor = {Markel, Scott}, + publisher = {Public Library of Science ({PLoS})}, +} + 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Pablo and Gatto, Laurent and Weber, Jonas and Bai, Mingze and Jimenez, Rafael C. and Sachsenberg, Timo and Pfeuffer, Julianus and Alvarez, Roberto Vera and Griss, Johannes and Nesvizhskii, Alexey I. and Perez-Riverol, Yasset}, + title = {{B}io{C}ontainers: an open-source and community-driven framework for software standardization}, + journal = {Bioinformatics}, + year = {2017}, + volume = {33}, + number = {16}, + pages = {2580--2582}, + month = mar, + doi = {10.1093/bioinformatics/btx192}, + editor = {Valencia, Alfonso}, + publisher = {Oxford University Press ({OUP})}, +} + +@Article{List2017, + author = {List, Markus and Ebert, Peter and Albrecht, Felipe}, + title = {Ten Simple Rules for Developing Usable Software in Computational Biology}, + journal = {{PLOS} Computational Biology}, + year = {2017}, + volume = {13}, + number = {1}, + pages = {e1005265}, + month = jan, + doi = {10.1371/journal.pcbi.1005265}, + editor = {Markel, Scott}, + publisher = {Public Library of Science ({PLoS})}, +} + +@Article{Liyanagunawardena2017, + author = {Liyanagunawardena, Tharindu R. and Scalzavara, Sandra and Williams, Shirley A.}, + title = {Open Badges: A Systematic Review of Peer-Reviewed Published Literature (2011-2015)}, + journal = {European Journal of Open, Distance and E-Learning}, + year = {2017}, + volume = {20}, + number = {2}, + month = dec, + pages = {1--16}, + issn = {1027-5207}, + doi = {10.1515/eurodl-2017-0013}, + publisher = {Walter de Gruyter {GmbH}}, +} + +@InProceedings{Lloret-Llinares2021, + author = {Lloret-Llinares, Marta and Calb{\'o}, Joaquim and Carbonell-Caballero, Jose and Conejero, Javier and Dorado-Ladera, Esther and Kastelic, Damjana and Matser, Vera and Morales, Ana Mar{\'i}a and Nortamo, Henrik and Thomas-Lopez, Daniel and Vazquez, Miguel and Villa, Alessandra}, + title = {The {PerMedCoE} competency framework to guide the training programme}, + year = {2021}, + eventtitle = {29\textsuperscript{th} Conference on Intelligent Systems for Molecular Biology and the 20\textsuperscript{th} European Conference on Computational Biology}, + eventdate = {2021-07-25/2021-07-30}, + venue = {Virtual Event}, + month = jul, + url = {https://permedcoe.eu/publication/the-permedcoe-competency-framework-to-guide-the-training-programme/}, +} + +@Misc{Lloret-Llinares2022, + author = {Lloret-Llinares, Marta and Thomas Lopez, Daniel}, + title = {The {EMBL}-{EBI} {C}ompetency {H}ub, a tool to support training and professional development}, + year = {2022}, + howpublished = {{FEBS} Network}, + month = oct, + url = {https://network.febs.org/posts/the-embl-ebi-competency-hub-a-tool-to-support-training-and-professional-development}, + urldate = {2023-07-20}, +} + +@Article{Lowndes2017, + author = {Lowndes, Julia S. Stewart and Best, Benjamin D. and Scarborough, Courtney and Afflerbach, Jamie C. and Frazier, Melanie R. and O'Hara, Casey C. and Jiang, Ning and Halpern, Benjamin S.}, + title = {Our path to better science in less time using open data science tools}, + journal = {Nature Ecology \& Evolution}, + year = {2017}, + volume = {1}, + number = {6}, + month = may, + doi = {10.1038/s41559-017-0160}, + publisher = {Springer Science and Business Media {LLC}}, +} + +@online{LRZIntroCpp, + author = {Guillen, Carla and Navarrete, Carmen}, + title = {Introduction to {C++}}, + publisher = {Leibniz Supercomputing Centre}, + url = {https://doku.lrz.de/2022-09-21-introduction-to-c++-hcpb2s22-11497182.html}, + urldate = {2023-06-16}, +} + +@online{LRZModernCpp, + author = {Iglberger, Klaus}, + title = {Modern {C++} Software Design}, + publisher = {Leibniz Supercomputing Centre}, + url = {https://doku.lrz.de/2022-10-26-modern-c++-software-design-hcpa1w22-11497188.html}, + urldate = {2023-06-16}, +} + +@InProceedings{Maassen2017, + author = {Maassen, Jason and Drost, Niels and van Hage, Willem and van Nieuwpoort, Rob}, + title = {Track 2 Lightning Talk: Software Development Best Practices at the {N}etherlands {eS}cience Center}, + booktitle = {Proceedings of the Workshop on Sustainable Software for Science: Practice and Experiences ({WSSSPE5.1})}, + year = {2017}, + editor = {Chue Hong, Neil and Druskat, Stephan and Haines, Robert and Jay, Caroline and Katz, Daniel S. and Sufi, Shoaib}, + eventdate = {2017-09-06/2017-09-06}, + venue = {University of Manchester, Manchester, United Kingdom}, + publisher = {figshare}, + month = sep, + doi = {10.6084/m9.figshare.5327587}, +} + +@Article{MacLean1999, + author = {MacLean, Marlie and Miles, Colin}, + title = {Swift action needed to close the skills gap in bioinformatics}, + journal = {Nature}, + year = {1999}, + volume = {401}, + number = {6748}, + month = sep, + pages = {10--10}, + doi = {10.1038/43269}, + publisher = {Springer Science and Business Media {LLC}}, +} + +@Article{Magana2014, + author = {Magana, Alejandra J. and Taleyarkhan, Manaz and Alvarado, Daniela Rivera and Kane, Michael and Springer, John and Clase, Kari}, + title = {A Survey of Scholarly Literature Describing the Field of Bioinformatics Education and Bioinformatics Educational Research}, + journal = {{CBE}---Life Sciences Education}, + year = {2014}, + editor = {Ledbetter, Mary Lee}, + volume = {13}, + number = {4}, + month = dec, + pages = {607--623}, + issn = {1931-7913}, + doi = {10.1187/cbe.13-10-0193}, + publisher = {American Society for Cell Biology ({ASCB})}, +} + +@Article{MalviyaThakur2022, + author = {Malviya-Thakur, Addi and Bernholdt, David E. and Godoy, William F. and Watson, Gregory R. and Doucet, Mathieu and Coletti, Mark A. and Rogers, David M. and McDonnell, Marshall and Billings, Jay Jay and Maccabe, Barney}, + title = {Research Software Engineering at {O}ak {R}idge {N}ational {L}aboratory}, + journal = {Computing in Science \& Engineering}, + year = {2022}, + volume = {24}, + number = {5}, + pages = {14--23}, + month = sep, + doi = {10.1109/mcse.2023.3260211}, + publisher = {Institute of Electrical and Electronics Engineers ({IEEE})}, +} + +@Article{Mangul2019, + author = {Mangul, Serghei and Mosqueiro, Thiago and Abdill, Richard J. and Duong, Dat and Mitchell, Keith and Sarwal, Varuni and Hill, Brian and Brito, Jaqueline and Littman, Russell Jared and Statz, Benjamin and Lam, Angela Ka-Mei and Dayama, Gargi and Grieneisen, Laura and Martin, Lana S. and Flint, Jonathan and Eskin, Eleazar and Blekhman, Ran}, + title = {Challenges and recommendations to improve the installability and archival stability of omics computational tools}, + journal = {{PLOS} Biology}, + year = {2019}, + volume = {17}, + number = {6}, + pages = {e3000333}, + month = jun, + doi = {10.1371/journal.pbio.3000333}, + publisher = {Public Library of Science ({PLoS})}, +} + +@InProceedings{Manotas2016, + author = {Manotas, Irene and Bird, Christian and Zhang, Rui and Shepherd, David and Jaspan, Ciera and Sadowski, Caitlin and Pollock, Lori and Clause, James}, + title = {An empirical study of practitioners' perspectives on green software engineering}, + booktitle = {Proceedings of the 2016 {IEEE}/{ACM} 38\textsuperscript{th} International Conference on Software Engineering ({ICSE 2016})}, + year = {2016}, + eventdate = {2016-05-14/2016-05-22}, + venue = {Austin, Texas, USA}, + publisher = {ACM}, + month = may, + isbn = {978-1-4503-3900-1}, + doi = {10.1145/2884781.2884810}, + address = {New York, New York, USA}, +} + +@Article{Martin2020, + author = {Martin, Leslie and Sibbald, Matthew}, + title = {Barking up the same tree? 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and Quigley, Niamh and Federer, Lisa and Joubert, Douglas and Dillman, Allissa and Wilkins, Kenneth and Chandramouliswaran, Ishwar and Navale, Vivek and Wright, Susan and Di Giorgio, Silvia and Fasemore, Mandela and F{\"o}rstner, Konrad and Sauerwein, Till and Seidlmayer, Eva and Zeitlin, Ilja and Bacon, Susannah and Hannan, Katie and Ferrers, Richard and Russell, Keith and Whitmore, Deidre and Dennis, Tim and Bangert, Daniel and Mero{\~n}o-Pe{\~n}uela, Albert and Daga, Enrico and Ryder, Gerry and Narayanan, Aswin and Kuchma, Iryna and Manzano-Patron, Jose and Mehnert, Andrew and Liffers, Matthias and Siebes, Ronald and Coen, Gerard and Gregory, Kathleen and Scharnhorst, Andrea and Cruz, Maria and Genova, Francoise and Kenworthy, Matthew and Meyers, Natalie and Rol, Evert and Santander-Vela, Juande and Yeomans, Joanne and Papadopoulou, Elli and Lazzeri, Emma and Mouchliadis, Leonidas and Lenaki, Katerina and Zoupanos, Spyros and Hristozov, Danail and Stoycheva, Stella and Leenarts, Ellen and Grootveld, Marjan and Huigen, Frans and Fankhauser, Eliane}, + title = {Top 10 {FAIR} Data \& Software Things}, + institution = {Australian Research Data Commons, Library Carpentry}, + year = {2019}, + type = {Global Sprint}, + month = feb, + doi = {10.5281/zenodo.3409968}, + publisher = {Zenodo}, +} + +@Article{Martins2020, + author = {Martins, Ana and Fonseca, Maria Jo{\~a}o and Lemos, Marina and Lencastre, Leonor and Tavares, Fernando}, + title = {Bioinformatics-Based Activities in High School: Fostering Students' Literacy, Interest, and Attitudes on Gene Regulation, Genomics, and Evolution}, + journal = {Frontiers in Microbiology}, + year = {2020}, + volume = {11}, + month = oct, + issn = {1664-302X}, + doi = {10.3389/fmicb.2020.578099}, + owner = {jgrad}, + publisher = {Frontiers Media {SA}}, + timestamp = {2023.08.29}, +} + +@online{MATSE, +author= {RWTH Aachen}, +title={Mathematisch-technische*r {S}oftwareentwickler*in}, +url={https://www.itc.rwth-aachen.de/cms/it-center/Karriere/MATSE-Ausbildung/~letj/Ueber-MATSE/}, +urldate={2023-07-27}, +} + +@Misc{Matser2016, + author = {Matser, Vera}, + title = {BioExcel Deliverable 4.2 -- Competency framework, mapping to current training \& initial training plan}, + year = {2016}, + howpublished = {Zenodo}, + doi = {10.5281/zenodo.264231}, +} + +@InProceedings{Maxville2009, + author = {Maxville, Valerie}, + title = {Preparing scientists for scalable software development}, + booktitle = {Proceedings of the 2009 {ICSE} Workshop on Software Engineering for Computational Science and Engineering}, + year = {2009}, + month = may, + publisher = {IEEE}, + doi = {10.1109/secse.2009.5069166}, + isbn = {978-1-4244-3737-5}, + eventdate = {2009-05-23/2009-05-23}, + venue = {Vancouver, British Columbia, Canada}, +} + +@InProceedings{Maxville2018, + author = {Maxville, Valerie}, + title = {Fundamentals of Programming for Science and Engineering}, + booktitle = {Proceedings of the {SE4S}cience '18: 2018 {IEEE}/{ACM} 13\textsuperscript{th} International Workshop on Software Engineering for Science}, + year = {2018}, + editor = {Bilof, Randall}, + eventdate = {2018-06-02/2018-06-02}, + venue = {Gothenburg, Sweden}, + publisher = {ACM}, + month = jun, + isbn = {978-1-4503-5748-7}, + pages = {28--31}, + doi = {10.1145/3194747.3194749}, + address = {New York, New York, USA}, +} + +@Article{McClatchy2020, + author = {McClatchy, Susan and Bass, Kristin M. and Gatti, Daniel M. and Moylan, Adam and Churchill, Gary}, + title = {Nine quick tips for efficient bioinformatics curriculum development and training}, + journal = {{PLOS} Computational Biology}, + year = {2020}, + editor = {Schwartz, Russell}, + volume = {16}, + number = {7}, + month = jul, + pages = {e1008007}, + doi = {10.1371/journal.pcbi.1008007}, + publisher = {Public Library of Science ({PLoS})}, +} + +@Article{McDaniel2016, + author = {McDaniel, Rudy and Fanfarelli, Joseph}, + title = {Building Better 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Learning: Involving Everyone}, + year = {2017}, + editor = {Tatnall, Arthur and Webb, Mary}, + booksubtitle = {Learning with and about Technologies and Computing}, + volume = {515}, + series = {{IFIP} Advances in Information and Communication Technology}, + publisher = {Springer International Publishing}, + isbn = {978-3-319-74310-3}, + pages = {494--505}, + doi = {10.1007/978-3-319-74310-3_50}, + address = {Cham, Switzerland}, + issn = {1868-422X}, + lccn = {2018930742}, + eventdate = {2017-07-03/2017-07-06}, + venue = {Dublin, Ireland}, +} + +@Article{Mehta2013, + author = {Mehta, Neil B. and Hull, Alan L. and Young, James B. and Stoller, James K.}, + title = {Just Imagine: New Paradigms for Medical Education}, + journal = {Academic Medicine}, + year = {2013}, + volume = {88}, + number = {10}, + month = oct, + pages = {1418--1423}, + issn = {1040-2446}, + doi = {10.1097/acm.0b013e3182a36a07}, + publisher = {Ovid Technologies (Wolters Kluwer Health)}, +} + +@InCollection{Menzel2023, + author = {Menzel, Michael}, + title = {Developing a Metadata Profile for Higher Education {OER} Repositories}, + booktitle = {Distributed Learning Ecosystems}, + year = {2023}, + editor = {Otto, Daniel and Scharnberg, Gianna and Kerres, Michael and Zawacki-Richter, Olaf}, + booksubtitle = {Concepts, Resources, and Repositories}, + publisher = {Springer Fachmedien Wiesbaden}, + isbn = {978-3-658-38703-7}, + pages = {263--278}, + doi = {10.1007/978-3-658-38703-7_14}, +} + +@Book{MICROBOLProject2023, + author = {{MICROBOL Project}}, + title = {Micro-credentials linked to the {B}ologna Key Commitments}, + year = {2023}, + subtitle = {Common Framework for Micro-credentials in the {EHEA}}, + url = {https://microcredentials.eu/wp-content/uploads/sites/20/2022/03/Micro-credentials_Framework_final-1.pdf}, + month = mar, +} + +@InProceedings{Milewicz2019, + author = {Milewicz, Reed and Rodeghero, Paige}, + title = {Position Paper: Towards Usability as a First-Class Quality of {HPC} Scientific Software}, + booktitle = {Proceedings of the 2019 {IEEE}/{ACM} 14\textsuperscript{th} International Workshop on Software Engineering for Science ({SE}4{S}cience)}, + year = {2019}, + month = may, + publisher = {IEEE}, + doi = {10.1109/se4science.2019.00012}, + isbn = {978-1-7281-2276-2}, + eventdate = {2019-05-28/2019-05-28}, + venue = {Montr{\'e}al, Qu{\'e}bec, Canada}, +} + +@online{MIT, +organization = {Massachusetts Institute of Technology}, +title = {The Missing Semester of Your CS Education}, +url = {https://missing.csail.mit.edu/}, +urldate = {2023-07-21} +} + +@InProceedings{Moldon2021, + author = {Moldon, Lukas and Strohmaier, Markus and Wachs, Johannes}, + title = {How Gamification Affects Software Developers: Cautionary Evidence from a Natural Experiment on {G}it{H}ub}, + booktitle = {Proceedings of the 2021 {IEEE}/{ACM} 43\textsuperscript{rd} International Conference on Software Engineering ({ICSE})}, + year = {2021}, + month = may, + publisher = {IEEE}, + doi = {10.1109/icse43902.2021.00058}, + eventdate = {2021-05-25/2021-05-28}, + isbn = {978-1-6654-0296-5}, +} + +@TechReport{Molto2020, + author = {Molt{\'o}, Germ{\'a}n and Campos, Isabel and Hardt, Marcus and Blanquer, Ignacio and Caballer, Miguel and Orviz, Pablo and David, Mario and Gomes, Jorge}, + title = {State of the Art Regarding Digital Badge Issuing Technologies}, + institution = {EOSC-SYNERGY}, + year = {2020}, + type = {White paper}, + month = mar, + doi = {10.20350/digitalCSIC/12505}, + publisher = {Digital.CSIC}, +} + +@Article{Moore2021, + author = {Moore, Benjamin and Carvajal-L{\'{o}}pez, Patricia and Chauke, Paballo Abel and Cristancho, Marco and Dominguez Del Angel, Victoria and Fernandez-Valverde, Selene L. and Ghouila, Amel and Gopalasingam, Piraveen and Guerfali, Fatma Zahra and Matimba, Alice and Morgan, Sarah L. and Oliveira, Guilherme and Ras, Verena and Reyes, Alejandro and De Las Rivas, Javier and Mulder, Nicola}, + title = {Ten simple rules for organizing a bioinformatics training course in low- and middle-income countries}, + journal = {{PLOS} Computational Biology}, + year = {2021}, + editor = {Markel, Scott}, + volume = {17}, + number = {8}, + month = aug, + pages = {e1009218}, + doi = {10.1371/journal.pcbi.1009218}, + publisher = {Public Library of Science ({PLoS})}, +} + +@InProceedings{Moreno2019, + author = {Moreno, David and Due{\~n}as, Santiago and Cosentino, Valerio and Fernandez, Miguel Angel and Zerouali, Ahmed and Robles, Gregorio and Gonzalez-Barahona, Jesus M.}, + title = {{S}orting{H}at: Wizardry on Software Project Members}, + booktitle = {Proceedings of the 2019 {IEEE}/{ACM} 41\textsuperscript{st} International Conference on Software Engineering: Companion Proceedings ({ICSE}-Companion)}, + year = {2019}, + publisher = {IEEE}, + month = may, + isbn = {978-1-7281-1764-5}, + pages = {51--54}, + doi = {10.1109/icse-companion.2019.00036}, + issn = {2574-1934}, + eventdate = {2019-05-25/2019-05-31}, + venue = {Montreal, Canada}, +} + +@Article{Morgan2017, + author = {Morgan, Sarah L. and Palagi, Patricia M. and Fernandes, Pedro L. and Koperlainen, Eija and Dimec, Jure and Marek, Diana and Larcombe, Lee and Rustici, Gabriella and Attwood, Teresa K. and Via, Allegra}, + title = {The {ELIXIR}-{EXCELERATE} {T}rain-the-{T}rainer pilot programme: empower researchers to deliver high-quality training [version 1; peer review: 2 approved]}, + journal = {F1000Research}, + year = {2017}, + volume = {6}, + month = aug, + pages = {1557}, + doi = {10.12688/f1000research.12332.1}, + publisher = {F1000 Research Ltd}, +} + +@Article{Morris2019, + author = {Morris, Bradley J. and Dragovich, Colleen and Todaro, Rachael and Balci, Sebiha and Dalton, Eve}, + title = {Comparing badges and learning goals in low- and high-stakes learning contexts}, + journal = {Journal of Computing in Higher Education}, + year = {2019}, + volume = {31}, + number = {3}, + month = may, + pages = {573--603}, + doi = {10.1007/s12528-019-09228-9}, + publisher = {Springer Science and Business Media {LLC}}, +} + +@Article{Mulder2018, + author = {Mulder, Nicola and Schwartz, Russell and Brazas, Michelle D. and Brooksbank, Cath and Gaeta, Bruno and Morgan, Sarah L. and Pauley, Mark A. and Rosenwald, Anne and Rustici, Gabriella and Sierk, Michael and Warnow, Tandy and Welch, Lonnie}, + title = {The development and application of bioinformatics core competencies to improve bioinformatics training and education}, + journal = {{PLOS} Computational Biology}, + year = {2018}, + editor = {Troyanskaya, Olga G.}, + volume = {14}, + number = {2}, + month = feb, + pages = {e1005772}, + doi = {10.1371/journal.pcbi.1005772}, + publisher = {Public Library of Science ({PLoS})}, +} + +@Article{Mundt2022, + author = {Mundt, Miranda R. and Beattie, Keith and Bisila, Jonathan and Ferenbaugh, Charles R. and Godoy, William F. and Gupta, Rinku and Guyer, Jonathan E. and Kiran, Miriam and Malviya-Thakur, Addi and Milewicz, Reed and Sims, Benjamin H. and Sochat, Vanessa and Teves, Joshua B.}, + title = {For the Public Good: Connecting, Retaining, and Recognizing Current and Future {RSEs} at {U.S.} National Research Laboratories and Agencies}, + journal = {Computing in Science \& Engineering}, + year = {2022}, + volume = {24}, + number = {6}, + pages = {6--13}, + month = nov, + doi = {10.1109/mcse.2023.3256759}, + publisher = {Institute of Electrical and Electronics Engineers ({IEEE})}, +} + +@article{NamingPain, + title = {Naming the Pain in Developing Scientific Software}, + author = {Wiese, Igor and Polato, Ivanilton and Pinto, Gustavo}, + year = {2020}, + month = jul, + journal = {IEEE Software}, + volume = {37}, + number = {4}, + pages = {75--82}, + issn = {1937-4194}, + doi = {10.1109/MS.2019.2899838}, + abstract = {The scientific software community's lack of computer science background and software engineering training takes a toll on scientists who need to develop software. We built a taxonomy of 2,110 reported problems and grouped them into three major axes: technical-related, socialrelated, and scientific-related problems.}, + keywords = {computer based training,computer science,computer science education,Documentation,Encoding,online learning platforms,Pain points,Programming,public domain software,scientific software community,Scientific Software Developers,scientific software development,software engineering,Software engineering,software engineering training,Software packages,Survey}, +} + +@Book{NatlAcadSci2022, + author = {{National Academies of Sciences, Engineering, and Medicine}}, + title = {Transforming Trajectories for Women of Color in Tech}, + year = {2022}, + editor = {Hammonds, Evelynn and Taylor, Valerie and Hutton, Rebekah}, + publisher = {The National Academies Press}, + isbn = {978-0-309-26908-7}, + doi = {10.17226/26345}, + address = {Washington, D.C., USA}, +} + +@Online{NCCentralUniversityIBMBadges, + author = {{North Carolina Central University}}, + title = {{NCCU} {SLIS} Partners with {IBM} Skills Academy}, + url = {https://www.nccu.edu/slis/nccu-slis-partners-ibm-skills-academy}, + urldate = {2023-07-03}, +} + +@online{NFDI, +organization = {German National Research Data Infrastructure ({NFDI})}, +title = {German National Research Data Infrastructure ({NFDI})}, +url = {https://www.nfdi.de/?lang=en}, +urldate = {2023-07-14} +} + +@online{NFDI4ING, +organization = {National Research Data Infrastructure for Engineering Sciences (NFDI4Ing)}, +title={National Research Data Infrastructure for Engineering Sciences ({NFDI4Ing})}, +url={https://nfdi4ing.de/about-us/}, +urldate={2023-07-14} +} + +@inbook{Nieva2020, +author = {Nieva de la Hidalga, Abraham and Hardisty, Alex and Martin, Paul and Magagna, Barbara and Zhao, Zhiming}, +year = {2020}, +month = jul, +pages = {61--81}, +title = {The {ENVRI} Reference Model}, +isbn = {978-3-030-52828-7}, +doi = {10.1007/978-3-030-52829-4_4}, +} + +@Article{Noor2022, + author = {Noor, Adeeb}, + title = {Improving bioinformatics software quality through incorporation of software engineering practices}, + journal = {{PeerJ} Computer Science}, + year = {2022}, + volume = {8}, + pages = {e839}, + month = jan, + doi = {10.7717/peerj-cs.839}, + publisher = {{PeerJ}}, +} + +@Article{Nordheim2021, + author = {von Nordheim, Gerret and Koppers, Lars and Boczek, Karin and Rieger, Jonas and Jentsch, Carsten and M{\"u}ller, Henrik and Rahnenf{\"u}hrer, J{\"o}rg}, + title = {Die {E}ntwicklung von {F}orschungssoftware als praktische {I}nterdisziplinarit{\"a}t}, + journal = {Medien \& Kommunikationswissenschaft}, + year = {2021}, + volume = {69}, + number = {1}, + pages = {80--96}, + doi = {10.5771/1615-634x-2021-1-80}, + publisher = {Nomos Verlag}, +} + +@Misc{NortheasternUniversityIBMBadges, + author = {{Northeastern University}}, + title = {{N}ortheastern {U}niversity and {IBM} partnership first to turn digital badges into academic credentials for learners worldwide}, + year = {2017}, + howpublished = {News@Northeastern}, + month = sep, + url = {https://news.northeastern.edu/2017/09/25/northeastern-university-and-ibm-partnership-first-to-turn-digital-badges-into-academic-credentials-for-learners-worldwide/}, + urldate = {2023-07-03}, +} + +@Article{Nowogrodzki2019, + author = {Nowogrodzki, Anna}, + title = {How to support open-source software and stay sane}, + journal = {Nature}, + year = {2019}, + volume = {571}, + number = {7763}, + pages = {133--134}, + month = jul, + doi = {10.1038/d41586-019-02046-0}, + publisher = {Springer Science and Business Media {LLC}}, +} + +@Article{OCais2020, + author = {O'Cais, Alan and Steinbach, Peter}, + title = {Expanding user communities with {HPC} {C}arpentry}, + journal = {The Journal of Computational Science Education}, + year = {2020}, + volume = {11}, + number = {1}, + month = jan, + pages = {21--25}, + issn = {2153-4136}, + doi = {10.22369/issn.2153-4136/11/1/4}, + publisher = {The Shodor Education Foundation, Inc.}, +} + +@online{OECD2023, +organization = {OECD}, +title = {Government researchers (indicator)}, +doi = {10.1787/c03b3052-en}, +urldate = {2023-05-23} +} + +@TechReport{OKeeffe2020, + author = {O'Keeffe, William}, + title = {{DigComp} at Work}, + institution = {Joint Research Centre (European Commission)}, + year = {2020}, + type = {Science for Policy report}, + subtitle = {Implementation guide}, + number = {JRC120645, EUR 30204 EN}, + month = jul, + doi = {10.2760/936769}, + address = {Luxembourg}, + isbn = {978-92-76-18581-9}, + issn = {1831-9424}, + publisher = {Publications Office of the European Union}, +} + +@Misc{Oliver2021, + author = {Oliver, Jeff and Goldman, Julie and F{\"o}rstner, Konrad}, + title = {Integration and reuse of {L}ibrary {C}arpentry content into curricula}, + year = {2021}, + month = mar, + url = {https://librarycarpentry.org/blog/2021/03/integration_and_reuse_of_lc_content_into_curricula/}, + urldate = {2023-06-27}, + publisher = {Library Carpentry}, +} + +@Online{OpenCoursesBadges, + author = {{Open Courses}}, + title = {About Open Badges}, + url = {https://opencourses.ie/about-open-badges/}, + urldate = {2023-07-03}, +} + +@TechReport{Operti2019a, + author = {Operti, Francesca and Tursi, Silvia}, + title = {Policy Influence Toolkit}, + institution = {Digital Competences Development System}, + year = {2019}, + type = {{DCDS} Report}, + number = {Document 21 Version 2}, + month = dec, + url = {http://www.dcds-project.eu/resources/dcds-policy-influence-toolkit/}, + publisher = {DCDS Project}, +} + +@TechReport{Operti2019b, + author = {Operti, Francesca}, + title = {Policy Recommendations}, + institution = {Digital Competences Development System}, + year = {2019}, + type = {{DCDS} Report}, + number = {Document 22 Version 0.3.1}, + month = dec, + url = {http://www.dcds-project.eu/resources/dcds-policy-recommendations/}, + publisher = {DCDS Project}, +} + +@InProceedings{Oprescu2022, + author = {Oprescu, Ana and Koedijk, Lukas and van Oostveen, Sander and Kok, Stephan}, + title = {Energy-driven software engineering}, + booktitle = {{S}us{T}rainable: Promoting Sustainability as a Fundamental Driver in Software Development Training and Education}, + year = {2022}, + editor = {Koopman, Pieter and Lubbers, Mart and Fernandes, Jo{\~{a}}o Paulo}, + booktitleaddon = {Revised lecture notes}, + publisher = {arXiv}, + month = apr, + pages = {27--35}, + doi = {10.48550/arXiv.2204.13993}, + eventdate = {2021-11-01/2021-11-05}, + venue = {Radboud University Nijmegen, Nijmegen, The Netherlands}, +} + +@TechReport{Orr2020a, + author = {Orr, Dominic and Pupinis, Mantas and Kirdulyt{\.e}, Greta}, + title = {Towards a {E}uropean approach to micro credentials}, + institution = {NESET}, + year = {2020}, + type = {Analytical report}, + subtitle = {A study of practices and commonalities in offering micro-credentials in {E}uropean higher education}, + number = {NC-03-20-553-EN-N}, + month = dec, + doi = {10.2766/7338}, + address = {Luxembourg}, + isbn = {978-92-76-21357-4}, + publisher = {Publications Office of the European Union}, +} + +@TechReport{Orr2020b, + author = {Orr, Dominic and Pupinis, Mantas and Kirdulyt{\.e}, Greta}, + title = {Towards a {E}uropean approach to micro credentials}, + institution = {NESET}, + year = {2020}, + type = {Executive Summary}, + subtitle = {A study of practices and commonalities in offering micro-credentials in {E}uropean higher education}, + number = {NC-03-20-554-EN-N}, + month = dec, + doi = {10.2766/392761}, + address = {Luxembourg}, + isbn = {978-92-76-21361-1}, + publisher = {Publications Office of the European Union}, + related = {Orr2020a}, + relatedstring = {Summary of}, +} + +@TechReport{OrvizFernandez2020, + author = {Orviz Fern{\'a}ndez, Pablo and David, Mario and Gomes, Jorge and Pina, Jo{\^a}o and Bernardo, Samuel and Campos Plasencia, Isabel and Molt{\'o}, Germ{\'a}n and Caballer, Miguel}, + title = {A set of Common Service Quality Assurance Baseline Criteria for Research Projects}, + institution = {EOSC Synergy}, + year = {2020}, + type = {Technical paper}, + month = apr, + doi = {10.20350/digitalCSIC/12533}, + publisher = {Digital.CSIC}, +} + +@Online{OSSFBestPracticeBadge, + author = {{Open Source Security Foundation}}, + title = {{OpenSSF} Best Practices Badge Program}, + year = {2021}, + url = {https://bestpractices.coreinfrastructure.org/en}, + urldate = {2023-07-12}, +} + +@TechReport{OSSMobilizationPlan, + author = {{The Linux Foundation} and {The Open Source Security Foundation}}, + title = {The Open Source Software Security Mobilization Plan}, + institution = {The Linux Foundation}, + year = {2022}, + month = may, + url = {https://openssf.org/oss-security-mobilization-plan/}, +} + +@InCollection{Otto2014, + author = {Otto, Nate and Hickey, Daniel T.}, + title = {Design Principles for Digital Badge Systems}, + booktitle = {New Horizons in Web Based Learning}, + year = {2014}, + editor = {Cao, Yiwei and V{\"a}ljataga, Terje and Tang, Jeff K.T. and Leung, Howard and Laanpere, Mart}, + booksubtitle = {2014 International Workshop on Social and Personal Computing for Web-Supported Learning Communities}, + volume = {8699}, + series = {Lecture Notes in Computer Science}, + publisher = {Springer International Publishing}, + isbn = {978-3-319-13296-9}, + pages = {179--184}, + doi = {10.1007/978-3-319-13296-9_20}, + address = {Cham, Switzerland}, + issn = {1611-3349}, + lccn = {2014956244}, + month = aug, + eventdate = {2014-08-14/2014-08-17}, + venue = {Tallinn, Estonia}, +} + +@Book{P8FutureUniversity2023a, + author = {{P8 Future University}}, + title = {R{\'e}f{\'e}rentiel des comp{\'e}tences num{\'e}riques pour enseigner}, + year = {2023}, + publisher = {Universit{\'e} de Lausanne and UniDistance Suisse}, + url = {https://wp.unil.ch/digitalskills/files/2023/05/P8_Referentiel_competences_numeriques_Enseigner_2023.pdf}, + address = {Lausanne, Switzerland}, + month = apr, + related = {Redecker2017}, + relatedstring = {Adapted from}, +} + +@Book{P8FutureUniversity2023b, + author = {{P8 Future University}}, + title = {R{\'e}f{\'e}rentiel des comp{\'e}tences num{\'e}riques pour {\'e}tudier}, + year = {2023}, + publisher = {Universit{\'e} de Lausanne and UniDistance Suisse}, + url = {https://wp.unil.ch/digitalskills/files/2023/05/P8_Referentiel_competences_numeriques_Etudier_2023.pdf}, + address = {Lausanne, Switzerland}, + month = apr, + related = {Vuorikari2022a}, + relatedstring = {Adapted from}, +} + +@Book{P8FutureUniversity2023c, + author = {{P8 Future University}}, + title = {Dossier Les badges num{\'e}riques ou Open Badges}, + year = {2023}, + publisher = {Universit{\'e} de Lausanne and UniDistance Suisse}, + url = {http://wp.unil.ch/digitalskills/files/2023/07/P8_Future_University_Dossier_Open_Badges.pdf}, + address = {Lausanne, Switzerland}, + month = may, +} + +@Misc{Papastamkou2019, + author = {Papastamkou, Sofia}, + title = {Welcome to {T}he {P}rogramming {H}istorian en fran{\c{c}}ais!}, + year = {2019}, + howpublished = {The Programming Historian blog}, + month = apr, + url = {https://programminghistorian.org/posts/welcome-ph-fr}, + urldate = {2023-08-23}, +} + +@Article{Park2019, + author = {Park, Sungjin and Kim, Sangkyun}, + title = {A Badge Design Framework for a Gamified Learning Environment: Cases Analysis and Literature Review for Badge Design}, + journal = {{JMIR} Serious Games}, + year = {2019}, + volume = {7}, + number = {2}, + month = may, + pages = {e14342}, + issn = {2291-9279}, + doi = {10.2196/14342}, + publisher = {JMIR Publications Inc.}, +} + +@Article{Patel2009, + author = {Patel, Vimla L. and Yoskowitz, Nicole A. and Arocha, Jose F. and Shortliffe, Edward H.}, + title = {Cognitive and learning sciences in biomedical and health instructional design: A review with lessons for biomedical informatics education}, + journal = {Journal of Biomedical Informatics}, + year = {2009}, + volume = {42}, + number = {1}, + month = feb, + pages = {176--197}, + doi = {10.1016/j.jbi.2008.12.002}, + publisher = {Elsevier {BV}}, +} + +@TechReport{Peer2Peer2011, + author = {{Peer 2 Peer University} and {Mozilla Foundation} and {MacArthur Foundation}}, + title = {An Open Badge System Framework}, + institution = {Mozilla Foundation}, + year = {2011}, + type = {Working Draft}, + subtitle = {A foundational piece on assessment and badges for open, informal and social learning environments}, + number = {4.0}, + month = may, + url = {https://wiki.mozilla.org/images/f/f3/OpenBadges_--_Working_Badge_Paper.pdf}, +} + +@Article{Pereira2021, + author = {Pereira, Rui and Couto, Marco and Ribeiro, Francisco and Rua, Rui and Cunha, J{\'{a}}come and Fernandes, Jo{\~{a}}o Paulo and Saraiva, Jo{\~{a}}o}, + title = {Ranking programming languages by energy efficiency}, + journal = {Science of Computer Programming}, + year = {2021}, + volume = {205}, + month = may, + pages = {102609}, + doi = {10.1016/j.scico.2021.102609}, + publisher = {Elsevier {BV}}, +} + +@Article{Pevzner2009, + author = {Pevzner, Pavel and Shamir, Ron}, + title = {Computing Has Changed Biology---Biology Education Must Catch Up}, + journal = {Science}, + year = {2009}, + volume = {325}, + number = {5940}, + month = jul, + pages = {541--542}, + doi = {10.1126/science.1173876}, + publisher = {American Association for the Advancement of Science ({AAAS})}, +} + +@Article{Pinto2017, + author = {Pinto, Gustavo and Castor, Fernando}, + title = {Energy Efficiency: A New Concern for Application Software Developers}, + journal = {Communications of the {ACM}}, + year = {2017}, + volume = {60}, + number = {12}, + month = nov, + pages = {68--75}, + issn = {1557-7317}, + doi = {10.1145/3154384}, + publisher = {Association for Computing Machinery ({ACM})}, +} + +@Article{Plomp2022, + author = {Plomp, Esther and Tsang, Emmy and Lavanchy, Paula M. Martinez}, + title = {Taking the {TU} Delft Carpentries Workshops Online}, + journal = {Journal of {eScience} Librarianship}, + year = {2022}, + volume = {11}, + number = {1}, + month = may, + issn = {2161-3974}, + doi = {10.7191/jeslib.2022.1221}, + publisher = {University of Massachusetts Medical School}, +} + +@Article{Poirier2021, + author = {Poirier, Therese I. and Weis, Logan}, + title = {Exploring pharmacy students' interest in digital badges}, + journal = {Currents in Pharmacy Teaching and Learning}, + year = {2021}, + volume = {13}, + number = {5}, + month = may, + pages = {506--511}, + doi = {10.1016/j.cptl.2021.01.004}, + publisher = {Elsevier {BV}}, +} + +@Article{Pomann2020, + author = {Pomann, Gina-Maria and Boulware, L. Ebony and Cayetano, Shari Messinger and Desai, Manisha and Enders, Felicity T. and Gallis, John A. and Gelfond, Jonathan and Grambow, Steven C. and Hanlon, Alexandra L. and Hendrix, Angelean and Kulkarni, Pandurang and Lapidus, Jodi and Lee, Hui-Jie and Mahnken, Jonathan D. and McKeel, Julie P. and Moen, Rebecca and Oster, Robert A. and Peskoe, Sarah and Samsa, Greg and Stewart, Thomas G. and Truong, Tracy and Wruck, Lisa and Thomas, Samantha M.}, + title = {Methods for training collaborative biostatisticians}, + journal = {Journal of Clinical and Translational Science}, + year = {2020}, + volume = {5}, + number = {1}, + month = aug, + pages = {e26}, + doi = {10.1017/cts.2020.518}, + publisher = {Cambridge University Press ({CUP})}, +} + +@Article{Pownall2023, + author = {Pownall, Madeleine and Azevedo, Fl{\'a}vio and K{\"o}nig, Laura M. and Slack, Hannah R. and Evans, Thomas Rhys and Flack, Zoe and Grinschgl, Sandra and Elsherif, Mahmoud M. and Gilligan-Lee, Katie A. and Oliveira, Catia M. 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+} + +@InProceedings{Queiroz2017, + author = {Queiroz, Francisco and Silva, Raniere and Miller, Jonah and {Sandor Brockhauser} and Fangohr, Hans}, + title = {Track 1 Paper: Good Usability Practices in Scientific Software Development}, + booktitle = {Proceedings of the Workshop on Sustainable Software for Science: Practice and Experiences ({WSSSPE5.1})}, + year = {2017}, + editor = {Chue Hong, Neil and Druskat, Stephan and Haines, Robert and Jay, Caroline and Katz, Daniel S. and Sufi, Shoaib}, + eventdate = {2017-09-06/2017-09-06}, + venue = {University of Manchester, Manchester, United Kingdom}, + publisher = {figshare}, + month = sep, + doi = {10.6084/m9.figshare.5331814}, +} + +@Article{Raish2016, + author = {Raish, Victoria and Rimland, Emily}, + title = {Employer Perceptions of Critical Information Literacy Skills and Digital Badges}, + journal = {College \& Research Libraries}, + year = {2016}, + volume = {77}, + number = {1}, + month = jan, + pages = {87--113}, + doi = {10.5860/crl.77.1.87}, + publisher = {American Library Association}, +} + +@InProceedings{Ramakrishnan2017, + author = {Ramakrishnan, Lavanya and Gunter, Daniel}, + title = {Ten Principles for Creating Usable Software for Science}, + booktitle = {Proceedings of the 13\textsuperscript{th} International Conference on e-{S}cience (e-{S}cience)}, + year = {2017}, + month = oct, + publisher = {IEEE}, + doi = {10.1109/escience.2017.34}, + isbn = {978-1-5386-2686-3}, + eventdate = {2017-10-24/2017-10-27}, + venue = {Auckland, New Zealand}, +} + +@TechReport{Redecker2017, + author = {Redecker, Christine}, + title = {European Framework for the Digital Competence of Educators: {DigCompEdu}}, + institution = {Joint Research Centre (European Commission)}, + year = {2017}, + type = {Science for Policy report}, + number = {JRC107466, EUR 28775 EN}, + month = nov, + doi = {10.2760/159770}, + address = {Luxembourg}, + editor = {Punie, Yves}, + isbn = {978-92-79-73494-6}, + issn = {1831-9424}, + publisher = {Publications Office of the European Union}, +} + +@TechReport{Redecker2019, + author = {Redecker, Christine}, + title = {Europ{\"a}ische {R}ahmen f{\"u}r die digitale {K}ompetenz {L}ehrender: {DigCompEdu}}, + institution = {Goethe-Institut e.V.}, + year = {2019}, + type = {Science for Policy report}, + number = {JRC107466}, + month = jul, + url = {https://joint-research-centre.ec.europa.eu/system/files/2019-09/digcompedu_german_final.pdf}, + address = {Germany}, + editor = {Punie, Yves}, + publisher = {Goethe-Institut e.V.}, + related = {Redecker2017}, + relatedstring = {Translation of}, +} + +@Article{Reid2015, + author = {Reid, Alan J. and Paster, Denise and Abramovich, Samuel}, + title = {Digital badges in undergraduate composition courses: effects on intrinsic motivation}, + journal = {Journal of Computers in Education}, + year = {2015}, + volume = {2}, + number = {4}, + month = aug, + pages = {377--398}, + doi = {10.1007/s40692-015-0042-1}, + publisher = {Springer Science and Business Media {LLC}}, +} + +@Article{Reinhart2021, + author = {Reinhart, Alex and Genovese, Christopher R.}, + title = {Expanding the Scope of Statistical Computing: Training Statisticians to Be Software Engineers}, + journal = {Journal of Statistics and Data Science Education}, + year = {2021}, + volume = {29}, + number = {sup1}, + pages = {S7--S15}, + month = jan, + doi = {10.1080/10691898.2020.1845109}, + publisher = {Informa {UK} Limited}, +} + +@online{ReproHack, + title = {{R}epro{H}ack {H}ub: Building Communities of Practice in Reproducibility}, + year = {2023}, + url = {https://www.reprohack.org/}, + urldate = {2023-07-25}, +} + +@Article{Revote2016, + author = {Revote, Jerico and Watson-Haigh, Nathan S. and Quenette, Steve and Bethwaite, Blair and McGrath, Annette and Shang, Catherine A.}, + title = {Development of a cloud-based {B}ioinformatics {T}raining {P}latform}, + journal = {Briefings in Bioinformatics}, + year = {2016}, + month = apr, + pages = {bbw032}, + 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{Proceedings of the 40\textsuperscript{th} International Conference on Software Engineering ({ICSE 2018})}, + year = {2018}, + publisher = {ACM}, + month = may, + isbn = {978-1-4503-5638-1}, + pages = {511--522}, + doi = {10.1145/3180155.3180209}, + address = {New York, New York, USA}, + eventdate = {2018-05-27/2018-06-03}, + venue = {Gothenburg, Sweden}, +} + +@TechReport{UNESCO2019, + author = {{UNESCO's General Conference}}, + title = {Recommendation on Open Educational Resources ({OER})}, + institution = {UNESCO}, + year = {2019}, + type = {Recommendations}, + number = {CL/4319}, + month = nov, + url = {https://www.unesco.org/en/legal-affairs/recommendation-open-educational-resources-oer}, + address = {Paris, France}, +} + +@techreport{UniStgtRS, +author = {Flemisch, Bernd and Hermann, Sibylle and Holm, Christian and Mehl, Miriam and Reina, Guido and Uekermann, Benjamin and Boehringer, David and Ertl, Thomas and Grad, Jean-No\"el and Iglezakis, Dorothea and Jaust, Alexander and 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Rustici, Gabriella and Warnow, Tandy}, + title = {Applying, Evaluating and Refining Bioinformatics Core Competencies (An Update from the Curriculum Task Force of {ISCB}'s Education Committee)}, + journal = {{PLOS} Computational Biology}, + year = {2016}, + volume = {12}, + number = {5}, + month = may, + pages = {e1004943}, + doi = {10.1371/journal.pcbi.1004943}, + publisher = {Public Library of Science ({PLoS})}, +} + +@TechReport{WhatResearchSoftware, + author = {{Netherlands eScience Center}}, + title = {What Is a {{Research Software Engineer}}?}, + subtitle = {A Definition by the {Netherlands eScience Center}}, + doi = {10.5281/zenodo.7994286}, + year = {2023}, + month = jun, + number = {Version 1.0}, + langid = {english}, +} + +@Article{White2022, + author = {White, Ethan and Brym, Zachary and Marx, Andrew and Riemer, Kristina and Marconi, Sergio and Harris, David and Cruz, Virnaliz and Ernest, S.}, + title = {{D}ata {C}arpentry for {B}iologists: A semester long {D}ata {C}arpentry course using ecological and other biological examples}, + journal = {Journal of Open Source Education}, + year = {2022}, + volume = {5}, + number = {50}, + month = apr, + pages = {139}, + doi = {10.21105/jose.00139}, + publisher = {The Open Journal}, +} + +@Article{Williams2016, + author = {Williams, Jason J. and Teal, Tracy K.}, + title = {A vision for collaborative training infrastructure for bioinformatics}, + journal = {Annals of the New York Academy of Sciences}, + year = {2016}, + volume = {1387}, + number = {1}, + issue = {Special Issue: Data Science, Learning, and Applications to Biomedical and Health Sciences}, + month = sep, + pages = {54--60}, + issn = {0077-8923}, + doi = {10.1111/nyas.13207}, + publisher = {Wiley}, +} + +@Article{Williams2019, + author = {Williams, Jason J. and Drew, Jennifer C. and Galindo-Gonzalez, Sebastian and Robic, Srebrenka and Dinsdale, Elizabeth and Morgan, William R. and Triplett, Eric W. and Burnette, James M. and Donovan, Samuel S. and Fowlks, 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{Software Carpentry: Getting Scientists to Write Better Code by Making Them More Productive}, + journal = {Computing in Science \& Engineering}, + year = {2006}, + volume = {8}, + number = {6}, + month = nov, + pages = {66--69}, + doi = {10.1109/mcse.2006.122}, + publisher = {Institute of Electrical and Electronics Engineers ({IEEE})}, +} + +@misc{Wilson2012a, + author = {Wilson, Greg}, + title = {{S}loan {F}oundation Grant to {S}oftware {C}arpentry and {M}ozilla}, + howpublished = {Software Carpentry Blog}, + year = {2012}, + month = jan, + url = {https://software-carpentry.org/blog/2012/01/sloan-foundation-grant-to-software-carpentry-and-mozilla.html}, + urldate = {2023-06-19}, +} + +@misc{Wilson2012b, + author = {Wilson, Greg}, + title = {Badging}, + howpublished = {Software Carpentry Blog}, + year = {2012}, + month = jan, + url = {https://software-carpentry.org/blog/2012/01/badging.html}, + urldate = {2023-06-19}, +} + +@misc{Wilson2012c, + author = {Wilson, Greg}, + title = 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+ url = {https://software-carpentry.org/blog/2014/11/korean-translation.html}, + urldate = {2023-06-19}, +} + +@Article{Wilson2014c, + author = {Wilson, Greg and Aruliah, D. A. and Brown, C. Titus and Chue Hong, Neil P. and Davis, Matt and Guy, Richard T. and Haddock, Steven H. 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How Female Computer Science Students Navigate being a Minority}, + booktitle = {Proceedings of the 26\textsuperscript{th} {ACM} Conference on Innovation and Technology in Computer Science Education}, + year = {2021}, + volume = {1}, + publisher = {ACM}, + month = jun, + isbn = {978-1-4503-8214-4}, + pages = {436--442}, + doi = {10.1145/3430665.3456329}, + address = {New York, New York, USA}, + eventdate = {2021-06-26/2021-07-01}, + venue = {Virtual Event}, +} + +@TechReport{Woodley2021, + author = {Woodley, Lou and Pratt, Katie and Sandstr{\"o}m, Malin and Wood-Charlson, Elisha and Davison, Jennifer and Leidolf, Andreas}, + title = {The {CSCCE} Skills Wheel}, + institution = {Center for Scientific Collaboration and Community Engagement}, + year = {2021}, + type = {Guidelines}, + subtitle = {Five core competencies and 45 skills to describe the role of the community engagement manager in {STEM}}, + month = jan, + doi = {10.5281/zenodo.4437294}, + publisher = {Zenodo}, +} + +@Article{Wuttke2022, + author = {Wuttke, Joachim and Cottrell, Stephen and Gonzalez, Miguel A. and Kaestner, Anders and Markvardsen, Anders and Rod, Thomas H. and Rozyczko, Piotr and Vardanyan, Gagik}, + title = {Guidelines for collaborative development of sustainable data treatment software}, + journal = {Journal of Neutron Research}, + year = {2022}, + volume = {24}, + number = {1}, + pages = {33--72}, + month = mar, + doi = {10.3233/jnr-220002}, + publisher = {{IOS} Press}, +} + +@Article{Yurkovich2017, + author = {Yurkovich, James T. and Yurkovich, Benjamin J. and Dr{\"a}ger, Andreas and Palsson, Bernhard O. and King, Zachary A.}, + title = {A {P}adawan Programmer's Guide to Developing Software Libraries}, + journal = {Cell Systems}, + year = {2017}, + volume = {5}, + number = {5}, + pages = {431--437}, + month = nov, + doi = {10.1016/j.cels.2017.08.003}, + publisher = {Elsevier {BV}}, +} + +@Article{Zahan2023, + author = {Zahan, Nusrat and Kanakiya, Parth and Hambleton, Brian and Shohan, Shohanuzzaman and Williams, Laurie}, + title = {{OpenSSF} Scorecard: On the Path Toward Ecosystem-Wide Automated Security Metrics}, + journal = {IEEE Security \& Privacy}, + year = {2023}, + pages = {2--14}, + doi = {10.1109/MSEC.2023.3279773}, +} + +@Article{Zhou2019, + author = {Zhou, Li and Chen, Liwen and Fan, Qinman and Ji, Yueli}, + title = {Students' Perception of Using Digital Badges in Blended Learning Classrooms}, + journal = {Sustainability}, + year = {2019}, + volume = {11}, + number = {7}, + month = apr, + pages = {2151}, + doi = {10.3390/su11072151}, + publisher = {MDPI AG}, +} + +@TechReport{Zignani2020, + author = {Zignani, Tiana and Massara, Flavia and Doncheva, Aneta and Tarandova, Spaska and {DAISSy Research Group} and Holma, Baiba and Pakalna, Daina}, + title = {Librarianship in {E}urope -- Mapping Professional Needs}, + institution = {Biblio Project Consortium}, + year = {2020}, + type = {Report}, + number = {Version 1.1}, + month = aug, + url = {https://all-digital.org/wp-content/uploads/2020/12/BIBLIO_WP2_Mapping-Professional-Needs_Report.pdf}, + publisher = {ALL DIGITAL AISBL}, +} + +@article{jones_codemeta_2017, + title = {{{CodeMeta}}: An Exchange Schema for Software Metadata}, + shorttitle = {{{CodeMeta}}}, + author = {Jones, Matthew B and Boettiger, Carl and Mayes, Abby Cabunoc and Arfon Smith and Slaughter, Peter and Niemeyer, Kyle and Gil, Yolanda and Fenner, Martin and Nowak, Krzysztof and Hahnel, Mark and Coy, Luke and Allen, Alice and Crosas, Merc{\`e} and Sands, Ashley and Hong, Neil Chue and Cruse, Patricia and Katz, Dan and Goble, Carole}, + year = {2017}, + doi = {10.5063/schema/codemeta-2.0} +} + + +@misc{alves_elixir_2021, + title = {{ELIXIR} {Software} {Management} {Plan} for {Life} {Sciences}}, + doi = {10.37044/osf.io/k8znb}, + urldate = {2022-06-23}, + publisher = {BioHackrXiv}, + author = {Alves, Renato and Bampalikis, Dimitrios and Castro, Leyla Jael and Fern{\'a}ndez, Jos{\'e} M. and Harrow, Jennifer and Kuzak, Mateusz and Mart{\'i}n del Pico, Eva and Psomopoulos, Fotis and Via, Allegra}, + month = oct, + year = {2021}, +} + +@techreport{martinez_ortiz_practical_2022, + title = {Practical guide to {Software} {Management} {Plans}}, + urldate = {2023-04-06}, + institution = {Zenodo}, + author = {Martinez-Ortiz, Carlos and Martinez Lavanchy, Paula and Sesink, Laurents and Olivier, Brett G. and Meakin, James and de Jong, Maaike and Cruz, Maria}, + month = oct, + year = {2022}, + doi = {10.5281/zenodo.7248877}, +} + +@techreport{castro_research_sw_metadata_2023, + type = {Charta}, + title = {``{Research} {Software} {Metadata}'' - {Working} {Group} {Charter} ({NFDI} section-metadata)}, + language = {en}, + urldate = {2023-11-05}, + author = {Castro, Leyla Jael and Ferenz, Stephan and Fuhrmans, Marc and G{\"o}pfert, Jan and Iglezakis, Dorothea and Karras, Oliver and Struck, Alexander}, + month = oct, + year = {2023}, + doi = {10.5281/zenodo.10036379}, +} + +@inproceedings{giraldo_metadata_2023, + title = {A metadata schema for machine-actionable {Software} {Management} {Plans}}, + doi = {10.4126/FRL01-006444988}, + language = {en}, + urldate = {2023-06-19}, + publisher = {PUBLISSO-FRL}, + author = {Giraldo, Olga and Geist, Lukas and Qui{\~n}ones, Nelson and Solanki, Dhwani and Alves, Renato and Bampalikis, Dimitrios and Fern{\'a}ndez Gonz{\'a}lez, Jos{\'e} M. and Martin Del Pico, Eva and Psomopoulos, Fotis E. and Via, Allegra and Rebholz-Schuhmann, Dietrich and Castro, Leyla Jael}, + year = {2023}, +} + +@article{druskat_hermes_2022, + title = {Software Publications with Rich Metadata: State of the Art, Automated Workflows and {{HERMES}} Concept}, + shorttitle = {Software Publications with Rich Metadata}, + author = {Druskat, Stephan and Bertuch, Oliver and Juckeland, Guido and Knodel, Oliver and Schlauch, Tobias}, + year = {2022}, + month = jan, + journal = {arXiv}, + doi = {10.48550/arXiv.2201.09015}, +} + +@article{druskat_cff_2021, + title = {Citation {{File Format}}}, + author = {Druskat, Stephan and Spaaks, Jurriaan H. and Chue Hong, Neil and Haines, Robert and Baker, James and Bliven, Spencer and Willighagen, Egon and {P\'erez-Su\'arez, David} and Konovalov, Olexandr}, + year = {2021}, + month = aug, + journal = {{Zenodo}}, + doi = {10.5281/zenodo.1003149}, + copyright = {Creative Commons Attribution 4.0 International, Open Access}, +} + +@article{turing_way_2022, + title = {The {{Turing Way}}: {{A}} Handbook for Reproducible, Ethical and Collaborative Research}, + shorttitle = {The {{Turing Way}}}, + author = {{The Turing Way Community}}, + year = {2022}, + month = jul, + doi = {10.5281/zenodo.3233853}, + publisher = {{Zenodo}}, + urldate = {2023-06-07}, + keywords = {collaboration,community,data science,ethics,handbook,reproducibility,research practices} +} diff --git a/paper.tex b/paper.tex index 856f3e8..a9f7b56 100644 --- a/paper.tex +++ b/paper.tex @@ -1,4 +1,13 @@ \documentclass{article} +\usepackage[]{biblatex} +\usepackage{hyperref} +\usepackage{xspace} + +\newcommand*{\eg}{e.g.\@\xspace} +\newcommand*{\ie}{i.e.\@\xspace} + +\addbibresource{bibliography.bib} +\addbibresource{positionpaper.bib} \title{Establishing RSE departments in German research institutions} \author{ Bernd Flemisch @@ -30,7 +39,7 @@ \section{Introduction} To solve pressing research challenges, better software is crucial [REF]. During the past decade, it gained ever-growing attention and is becoming accepted as a research result on its own. The term “Research software” is still defined somewhat differently within the community. -We follow here the definition: “Research Software includes source code files, algorithms, scripts, computational workflows and executables that were created during the research process or for a research purpose”, with full definition and discussion provided in [REF https://doi.org/10.5281/zenodo.5504016]. +We follow here the definition: “Research Software includes source code files, algorithms, scripts, computational workflows and executables that were created during the research process or for a research purpose”, with full definition and discussion provided in~\autocite{Gruenpeter2021}. The number of people developing software in academia is constantly rising [REF]. Research Software Engineering are actions necessary to create, adapt or maintain Research Software or train others to do so. @@ -57,11 +66,11 @@ \section{Motivation} \subsection{Tasks - Why do central software services make sense?} One of the services a centralized RSE department likely will provide is training to improve the often low-quality code developed by beginners [REF low-quality]. -Examples for organizational training efforts are the Helmholtz HIFIS group [https://events.hifis.net/category/4/], the Scientific Software Center in Heidelberg [https://www.ssc.uni-heidelberg.de/en], the Competence Center Digital Research in Jena (zedif: [https://www.zedif.uni-jena.de/en/]), and the SURESOFT workshops series in Braunschweig [https://www.tu-braunschweig.de/suresoft]. -Another national pioneer is the Göttingen State and University Library who set up a group of RSEs offering – besides training – services like data modeling and visualization, digital editions, portal development and more. They reported a remarkable increase in software quality, better grant applications, less brain drain and overall employee satisfaction levels [REF https://doi.org/10.5281/zenodo.7727988]. +Examples for organizational training efforts are the Helmholtz HIFIS group [https://events.hifis.net/category/4/], the Scientific Software Center in Heidelberg [https://www.ssc.uni-heidelberg.de/en], the Competence Center Digital Research in Jena (zedif: [https://www.zedif.uni-jena.de/en/]), and the SURESOFT workshops series in Braunschweig ~\autocite{SURESOFTLink}. +Another national pioneer is the Göttingen State and University Library who set up a group of RSEs offering – besides training – services like data modeling and visualization, digital editions, portal development and more. They reported a remarkable increase in software quality, better grant applications, less brain drain and overall employee satisfaction levels~\autocite{schimavoigt2023}. The demand for such services appears to be ever-increasing. -Cite for international comparison https://doi.org/10.1109/MCSE.2023.3264113 Princeton RSE group model +Cite for international comparison \autocite{Cosden2022} Princeton RSE group model \subsection{Structure} @@ -88,8 +97,8 @@ \subsection{People} RSE departments act as knowledge hubs in a network of academic developers[REF: Dissertation zur Verstetigung von Netzwerken]. This enables the embedded experts to maintain in-depth knowledge and to assess current trends and developments, both in research as well as technology. According to [SUB Goettingen] the employee satisfaction significantly increases with RSE services. -The SUB library department “Software and Digital Services” was founded to support their (research) software needs [REF https://doi.org/10.5281/zenodo.7727987]. -Soon after, this department received inquiries from the campus at large, showcasing the need for such services [SuccessStory from a university library, e.g. https://zenodo.org/records/7727988]. The Carpentries [Footnote: https://carpentries.org/] exemplify a similar success story [REF SuccessStory Carpentries https://carpentries.org/testimonials/]. Requests or suggestions for even more training show the need for such services. +The SUB library department “Software and Digital Services” was founded to support their (research) software needs~\autocite{schimavoigt2023}. +Soon after, this department received inquiries from the campus at large, showcasing the need for such services [SuccessStory from a university library, \eg ~\autocite{schimavoigt2023}. The Carpentries~\autocite{Carpentries} exemplify a similar success story [REF SuccessStory Carpentries https://carpentries.org/testimonials/]. Requests or suggestions for even more training show the need for such services. RSE services which benefit all disciplines/departments may represent a unique selling point for organizations competing for the brightest minds. See the examples from leading universities above. @@ -113,10 +122,10 @@ \section{Benefits - Why centralized RSEs would become a success story} These data experts support research projects in several aspects including DMPlans, grant applications, data availability for journal publications, compliance, FAIRification and more. With the increasing recognition of software as a research object/result, it is easy to see how projects will require and benefit from very similar support in software needs in the near future. -The latest DFG grant application templates require discussion of data and software management (in line with their GWP guidelines [REF]). +The latest DFG grant application templates require discussion of data and software management (in line with their GWP guidelines~\autocite{dfg_gsp}). We also see the first grant applications [REF welcome trust? or others] requiring Software Management Plans (SMP). A few journals started asking for code submission [REF CHORUS? Nature?]. -The rather complex assessment of FAIRness [REF apples to apples] has widened from data to software [REF software FAIR assessment, 10.15497/RDA00068]. +The rather complex assessment of FAIRness [REF apples to apples] has widened from data to software~\autocite{fair_data_maturity_model_working_group_2020}. A decentralized RSE will provide training, improve software, support research publications, in close relationship with the local research team. @@ -139,7 +148,7 @@ \subsection{Measures} Scarce resources like professional staff, time and money are not put to waste. Instead, better software (publications) will lead to outstanding reputation. A professionalization in software development and management can be expected to lead from research project prototypes to software products to the benefit of everyone. -Less technical debt [Footnote: https://www.gartner.com/en/information-technology/glossary/technical-debt] will be amassed, which is beneficial for reuse. +Less technical debt \footnote{\url{https://www.gartner.com/en/information-technology/glossary/technical-debt}} will be amassed, which is beneficial for reuse. Necessary software management activities like (git-based) version control are assumed to improve collaboration among researchers. @@ -237,17 +246,17 @@ \subsection{Development Services} If the research within the research institution heavily relies on specific pieces of research software, sustaining these pieces of research software is of vital importance for the long term success of the research institution. Relying on a workforce that is subject to academic labor turnover poses a risk of knowledge loss. -If the development is done in an RSE department, institutional memory about critical research software infrastructures can be created and the long term availability of these infrastructures can be improved. This applies both to domain-specific research software (e.g. simulation frameworks widely used throughout the institution) and to domain-agnostic research software and data infrastructure (e.g. Jupyter, workflow management systems, data repository software). +If the development is done in an RSE department, institutional memory about critical research software infrastructures can be created and the long term availability of these infrastructures can be improved. This applies both to domain-specific research software (e.g. simulation frameworks widely used throughout the institution) and to domain-agnostic research software and data infrastructure (\eg Jupyter, workflow management systems, data repository software). While all of the above development services can be flexibly performed either at the RSE hub or its spokes, there are advantages of having a hub in the process: It allows building up highly specialized technical expertise with a long term perspective and reuse it across the entire institution. Examples of topics that would benefit from such expertise pooling are e.g. mobile app development (University of Manchester: https://research-it.manchester.ac.uk/services/mobile-development-service-mds/ - use as \#SuccessStory?) and UI/UX development. RSE departments that offer development services at all scales have proven to be a success story at many research institutions and have rapidly grown in size due to the influx of third party funding. -Notable examples are e.g. Manchester [REF], Notre-Dame [REF], STANFORD, PRINCETON [https://arxiv.org/pdf/2210.16261.pdf]. +Notable examples are e.g. Manchester [REF], Notre-Dame [REF], STANFORD, Princeton~\autocite{Cosden2022}. [SuccessStory] -Founded in January 2017, the Research Computing department of Princeton University has experienced a tremendous growth from the initial two FTEs to a total of 18 FTEs in the span of five years [https://arxiv.org/pdf/2210.16261.pdf]. +Founded in January 2017, the Research Computing department of Princeton University has experienced a tremendous growth from the initial two FTEs to a total of 18 FTEs in the span of five years~\autocite{Cosden2022}. This growth is based on a continuous influx of new funded projects once successful projects showcase the additional value of RSE services to researchers. \subsection{Teaching Services} @@ -308,7 +317,7 @@ \subsection{Research Software Engineering research} \subsection{Software Maintenance Service} -Funder policies such as [DFG Regeln der Guten Wissenschaftlichen Praxis] require long-term preservation of used research data and software in an adequate way. +Funder policies such as~\autocite{dfg_gsp} require long-term preservation of used research data and software in an adequate way. For research data, established procedures to implement this requirement exist. For research software, dedicated archiving solutions such as Software Heritage [REF] or Zenodo's GitHub integration [REF] exist. @@ -408,7 +417,8 @@ \subsection{Staff acquisition/People} In order to retain RSEs it should be possible for them to become experts in a field and hence this should make this job more attractive to young RSEs, in order to mitigate the problem that some will only see this job as a one-year stint after their PhD and then move on to something else. To facilitate the retention of skilled people, industry has long identified education as an effective tool. For RSEs this should be helped by to be formed academic facilities that enable them to keep on learning skills after their first professional qualification, supported by the respective certification programs. In the longer run, Research Software Engineering should be integrated into the existing study programmes. One option here would be the creation of an RSE master as a specialization for a computer science bachelor. This should be complemented by adding a minor in application-domain study programs such as biology, physics, engineering etc. to facilitate the communication between the corresponding two groups of RSEs. [\#SuccessStory: Msc “Scientific Computing” at TU Berlin, maybe use others from list as well https://www.tu.berlin/en/studying/study-programs/all-programs-offered/study-course/scientific-computing-m-sc/ ] -\begin{thebibliography}{9} -\end{thebibliography} +%\begin{thebibliography}{9} +%\end{thebibliography} +\printbibliography[heading=bibintoc] -\end{document} \ No newline at end of file +\end{document} diff --git a/positionpaper.bib b/positionpaper.bib new file mode 100644 index 0000000..bbfe32b --- /dev/null +++ b/positionpaper.bib @@ -0,0 +1,33 @@ +@misc{schimavoigt2023, + author = {Schima-Voigt, Kristine}, + title = {{Research Software Engineering als Service an einer + wissenschaftlichen Bibliothek}}, + month = mar, + year = 2023, + publisher = {Zenodo}, + doi = {10.5281/zenodo.7727988}, + url = {https://doi.org/10.5281/zenodo.7727988} +} + +@ARTICLE{Cosden2022, + author={Cosden, Ian A.}, + journal={{Computing in Science \& Engineering}}, + title={The Princeton University Research Software Engineering Group Model: Operational and Organizational Approaches}, + year={2022}, + volume={24}, + number={5}, + pages={24-31}, + keywords={Software engineering;Research and development;Leadership;Codes;Collaboration;Computational modeling;Best practices}, + doi={10.1109/MCSE.2023.3264113}} + +@misc{fair_data_maturity_model_working_group_2020, + author = {FAIR Data Maturity Model Working Group}, + title = {{FAIR Data Maturity Model. Specification and + Guidelines}}, + month = jun, + year = 2020, + publisher = {Zenodo}, + version = {1.0}, + doi = {10.15497/rda00050}, + url = {https://doi.org/10.15497/rda00050} +} \ No newline at end of file